Don't stroke out when backup doesn't exist in db

Implement special flags for dump and reset db
Implement proper "reset" that reads snapshots from database
2025-07-20 11:48:55 +02:00 · 2025-07-20 11:47:45 +02:00 · 2025-07-20 11:43:25 +02:00 · 2025-07-20 11:38:08 +02:00 · 2025-07-20 11:20:19 +02:00 · 2025-07-20 11:12:58 +02:00
29 changed files with 7528 additions and 2321 deletions
--- a/.gitignore
+++ b/.gitignore
@@ -1 +1,3 @@
 *.exe
+.qodo
+*.sqlite
--- a/.vscode/launch.json
+++ b/.vscode/launch.json
@@ -5,12 +5,77 @@
 	"version": "0.2.0",
 	"configurations": [
 		{
-			"name": "Launch Package",
+			"name": "Launch Package (Barotrauma)",
 			"type": "go",
 			"request": "launch",
 			"mode": "auto",
-			"program": "${fileDirname}",
-			"args": []
+			"program": "${workspaceFolder}",
+			"cwd": "C:/Users/Administrator/Seafile/Games-Barotrauma",
+			"args": [
+				"-loglevel",
+				"trace",
+				"-cook",
+				"*.yml",
+			]
+		},
+		{
+			"name": "Launch Package (Payday 2)",
+			"type": "go",
+			"request": "launch",
+			"mode": "auto",
+			"program": "${workspaceFolder}",
+			"cwd": "C:/Users/Administrator/Seafile/Games-Payday2",
+			"args": [
+				"-loglevel",
+				"trace",
+				"*.yml",
+			]
+		},
+		{
+			"name": "Launch Package (Barotrauma cookfile)",
+			"type": "go",
+			"request": "launch",
+			"mode": "auto",
+			"program": "${workspaceFolder}",
+			"cwd": "C:/Users/Administrator/Seafile/Games-Barotrauma",
+			"args": [
+				"-loglevel",
+				"trace",
+				"-cook",
+				"cookassistant.yml",
+			]
+		},
+		{
+			"name": "Launch Package (Quasimorph cookfile)",
+			"type": "go",
+			"request": "launch",
+			"mode": "auto",
+			"program": "${workspaceFolder}",
+			"cwd": "C:/Users/Administrator/Seafile/Games-Quasimorph",
+			"args": [
+				"cook.yml",
+			]
+		},
+		{
+			"name": "Launch Package (Rimworld cookfile)",
+			"type": "go",
+			"request": "launch",
+			"mode": "auto",
+			"program": "${workspaceFolder}",
+			"cwd": "C:/Users/Administrator/Seafile/Games-Rimworld/294100",
+			"args": [
+				"cookVehicles.yml",
+			]
+		},
+		{
+			"name": "Launch Package (Workspace)",
+			"type": "go",
+			"request": "launch",
+			"mode": "auto",
+			"program": "${workspaceFolder}",
+			"args": [
+				"tester.yml",
+			]
 		}
 	]
 }
--- a/README.md
+++ b/README.md
@@ -0,0 +1,116 @@
+# Big Chef
+
+A Go-based tool for modifying XML, JSON, and text documents using XPath/JSONPath/Regex expressions and Lua transformations.
+
+## Features
+
+- **Multi-Format Processing**:
+  - XML (XPath)
+  - JSON (JSONPath) 
+  - Text (Regex)
+- **Node Value Modification**: Update text values in XML elements, JSON properties or text matches
+- **Attribute Manipulation**: Modify XML attributes, JSON object keys or regex capture groups
+- **Conditional Logic**: Apply transformations based on document content
+- **Complex Operations**: 
+  - Mathematical calculations
+  - String manipulations
+  - Date conversions
+  - Structural changes
+  - Whole ass Lua environment
+- **Error Handling**: Comprehensive error detection for:
+  - Invalid XML/JSON
+  - Malformed XPath/JSONPath
+  - Lua syntax errors
+
+## Usage Examples
+
+### 1. Basic field modification
+```xml
+<!-- Input -->
+<price>44.95</price>
+
+<!-- Command -->
+chef -xml "//price" "v=v*2" input.xml
+
+<!-- Output -->
+<price>89.9</price>
+```
+
+### 2. Supports glob patterns
+```xml
+chef -xml "//price" "v=v*2" data/**.xml
+```
+
+### 3. Attribute Update
+```xml
+<!-- Input -->
+<item price="10.50"/>
+
+<!-- Command -->
+chef -xml "//item/@price" "v=v*2" input.xml
+
+<!-- Output --> 
+<item price="21"/>
+```
+
+### 3. JSONPath Transformation
+```json
+// Input
+{
+  "products": [
+    {"name": "Widget", "price": 19.99},
+    {"name": "Gadget", "price": 29.99}
+  ]
+}
+
+// Command
+chef -json "$.products[*].price" "v=v*0.75" input.json
+
+// Output
+{
+  "products": [
+    {"name": "Widget", "price": 14.99},
+    {"name": "Gadget", "price": 22.49}
+  ]
+}
+```
+
+### 4. Regex Text Replacement
+Regex works slightly differently, up to 12 match groups are provided as v1..v12 and s1..s12 for numbers and strings respectively.
+A special shorthand "!num" is also provided that simply expands to `(\d*\.?\d+)`.
+```xml
+<!-- Input -->
+<description>Price: $15.00 Special Offer</description>
+
+<!-- Command -->
+chef "Price: $!num Special Offer" "v1 = v1 * 0.92" input.xml
+
+<!-- Output -->
+<description>Price: $13.80 Special Offer</description>
+```
+
+### 5. Conditional Transformation
+```xml
+<!-- Input -->
+<item stock="5" price="10.00"/>
+
+<!-- Command -->
+chef -xml "//item" "if tonumber(v.stock) > 0 then v.price = v.price * 0.8 end" input.xml
+
+<!-- Output -->
+<item stock="5" price="8.00"/>
+```
+
+## Installation
+
+```bash
+go build -o chef main.go
+```
+
+```bash
+# Process XML file
+./chef -xml "//price" "v=v*1.2" input.xml
+
+# Process JSON file 
+./chef -json "$.prices[*]" "v=v*0.9" input.json
+```
--- a/TalentsMechanic.xml
+++ b/TalentsMechanic.xml
@@ -1,651 +0,0 @@
-<?xml version="1.0" encoding="utf-8"?>
-<Talents>
-  <Talent identifier="powerarmor">
-    <Icon texture="Content/UI/TalentsIcons3.png" sheetindex="5,6" sheetelementsize="128,128"/>
-    <Description tag="talentdescription.powerarmor">
-      <Replace tag="[bonusmovement]" value="25" color="gui.green"/>
-    </Description>
-    <Description tag="talentdescription.unlockrecipe">
-      <Replace tag="[itemname]" value="entityname.exosuit" color="gui.orange"/>
-    </Description>
-    <AbilityGroupInterval interval="0.9">
-      <Conditions>
-        <AbilityConditionHasItem tags="deepdivinglarge" />
-      </Conditions>
-      <Abilities>
-        <CharacterAbilityModifyStat stattype="MovementSpeed" value="0.25" />
-      </Abilities>
-    </AbilityGroupInterval>
-    <AddedRecipe itemidentifier="exosuit"/>
-  </Talent>
-  
-  <Talent identifier="foolhardy">
-    <Icon texture="Content/UI/TalentsIcons3.png" sheetindex="4,6" sheetelementsize="128,128"/>
-    <Description tag="talentdescription.lowhealthstatboost">
-      <Replace tag="[health]" value="50" color="gui.green"/>
-    </Description>
-    <Description tag="talentdescription.additionalstattype">
-      <Replace tag="[amount]" value="20" color="gui.green"/>
-      <Replace tag="[stattype]" value="stattypenames.physicalresistance" color="gui.orange"/>
-    </Description>
-    <AbilityGroupInterval interval="0.9">
-      <Conditions>
-        <AbilityConditionAboveVitality invert="true" vitalitypercentage="0.5"/>
-      </Conditions>
-      <Abilities>
-        <CharacterAbilityApplyStatusEffects>
-          <StatusEffects>
-            <StatusEffect type="OnAbility" target="Character" disabledeltatime="true" multiplyafflictionsbymaxvitality="true">
-              <Affliction identifier="foolhardy" amount="1.0"/>
-            </StatusEffect>
-          </StatusEffects>
-        </CharacterAbilityApplyStatusEffects>
-      </Abilities>
-    </AbilityGroupInterval>
-  </Talent>
-
-  <Talent identifier="berserker">
-    <Icon texture="Content/UI/TalentsIcons3.png" sheetindex="3,6" sheetelementsize="128,128"/>
-    <Description tag="talentdescription.lowhealthstatboost">
-      <Replace tag="[health]" value="50" color="gui.green"/>
-    </Description>
-    <Description tag="talentdescription.additionalstattype">
-      <Replace tag="[amount]" value="20" color="gui.green"/>
-      <Replace tag="[stattype]" value="stattypenames.meleedamagebonus" color="gui.orange"/>
-    </Description>
-    <AbilityGroupInterval interval="0.9">
-      <Conditions>
-        <AbilityConditionAboveVitality invert="true" vitalitypercentage="0.5"/>
-      </Conditions>
-      <Abilities>
-        <CharacterAbilityApplyStatusEffects>
-          <StatusEffects>
-            <StatusEffect type="OnAbility" target="Character" disabledeltatime="true" multiplyafflictionsbymaxvitality="true">
-              <Affliction identifier="berserker" amount="1.0"/>
-            </StatusEffect>
-          </StatusEffects>
-        </CharacterAbilityApplyStatusEffects>
-      </Abilities>
-    </AbilityGroupInterval>
-  </Talent>
-  
-  <Talent identifier="mudraptorwrestler">
-    <Icon texture="Content/UI/TalentsIcons3.png" sheetindex="2,6" sheetelementsize="128,128"/>
-    <Description tag="talentdescription.mudraptorwrestler">
-      <Replace tag="[amount]" value="50" color="gui.green"/>
-    </Description>
-    <Description tag="talentdescription.additionalstattypeself">
-      <Replace tag="[amount]" value="10" color="gui.green"/>
-      <Replace tag="[stattype]" value="stattypenames.physicalresistance" color="gui.orange"/>
-    </Description>
-    <AbilityGroupEffect abilityeffecttype="OnAttack">
-      <Conditions>
-        <AbilityConditionAttackData weapontype="NoWeapon,Melee" />
-        <AbilityConditionCharacter>
-          <Conditional group="eq mudraptor" />
-        </AbilityConditionCharacter>
-      </Conditions>
-      <Abilities>
-        <CharacterAbilityModifyAttackData addeddamagemultiplier="0.5"/>
-      </Abilities>
-    </AbilityGroupEffect>
-    <AbilityGroupEffect abilityeffecttype="None">
-      <Abilities>
-        <CharacterAbilityGiveResistance resistanceid="damage" multiplier="0.9"/>
-      </Abilities>
-    </AbilityGroupEffect>
-  </Talent>
-  
-  <Talent identifier="heavylifting">
-    <Icon texture="Content/UI/TalentsIcons3.png" sheetindex="1,6" sheetelementsize="128,128"/>
-    <Description tag="talentdescription.heavylifting">
-      <Replace tag="[amount]" value="20" color="gui.green"/>
-    </Description>
-    <AbilityGroupInterval interval="0.9">
-      <Conditions>
-        <AbilityConditionHoldingItem tags="alienartifact,crate"/>
-      </Conditions>
-      <Abilities>
-        <CharacterAbilityModifyStat stattype="MovementSpeed" value="0.2"/>
-      </Abilities>
-    </AbilityGroupInterval>
-  </Talent>
-
-  <Talent identifier="iamthatguy">
-    <Icon texture="Content/UI/TalentsIcons3.png" sheetindex="0,6" sheetelementsize="128,128"/>
-    <Description tag="talentdescription.iamthatguy">
-      <Replace tag="[amount]" value="20" color="gui.green"/>
-    </Description>
-    <Description tag="talentdescription.skillbonus">
-      <Replace tag="[amount]" value="20" color="gui.green"/>
-      <Replace tag="[skillname]" value="stattypenames.weaponsskillbonus" color="gui.orange"/>
-    </Description>
-    <Description tag="talentdescription.unlockrecipe">
-      <Replace tag="[itemname]" value="entityname.heavywrench" color="gui.orange"/>
-    </Description>
-    <AbilityGroupEffect abilityeffecttype="None">
-      <Abilities>
-        <CharacterAbilityGiveStat stattype="WeaponsSkillBonus" value="20"/>
-      </Abilities>
-    </AbilityGroupEffect>
-    <AbilityGroupEffect abilityeffecttype="OnAddDamageAffliction">
-      <Abilities>
-        <CharacterAbilityModifyAffliction afflictionidentifiers="blunttrauma" addedmultiplier="0.2" />
-      </Abilities>
-    </AbilityGroupEffect>
-    <AddedRecipe itemidentifier="heavywrench"/>
-  </Talent>
-  
-  <Talent identifier="robotics">
-    <Icon texture="Content/UI/TalentsIcons3.png" sheetindex="3,7" sheetelementsize="128,128"/>
-    <Description tag="talentdescription.robotics"/>
-    <Description tag="talentdescription.roboticsreminder">
-      <Replace tag="[amount]" value="2" color="gui.green"/>
-    </Description>
-    <Description tag="talentdescription.unlockrecipe">
-      <Replace tag="[itemname]" value="entityname.defensebotspawner,entityname.defensebotammobox" color="gui.orange"/>
-    </Description>
-    <AddedRecipe itemidentifier="defensebotspawner"/>
-    <AddedRecipe itemidentifier="defensebotammobox"/>
-  </Talent>
-  
-  <Talent identifier="ironstorm">
-    <Icon texture="Content/UI/TalentsIcons3.png" sheetindex="7,5" sheetelementsize="128,128"/>
-    <Description tag="talentdescription.ironstorm">
-      <Replace tag="[chance]" value="10" color="gui.green"/>
-    </Description>
-    <Description tag="talentdescription.unlockrecipe">
-      <Replace tag="[itemname]" value="entityname.scrapcannon" color="gui.orange"/>
-    </Description>
-    <AbilityGroupEffect abilityeffecttype="None">
-      <Abilities>
-        <CharacterAbilitySetMetadataInt identifier="tiermodifieroverride" value="3"/>
-      </Abilities>
-    </AbilityGroupEffect>
-    <AddedRecipe itemidentifier="scrapcannon"/>
-  </Talent>
-  
-  <Talent identifier="residualwaste">
-    <Icon texture="Content/UI/TalentsIcons3.png" sheetindex="6,5" sheetelementsize="128,128"/>
-    <Description tag="talentdescription.residualwaste">
-      <Replace tag="[chance]" value="20" color="gui.green"/>
-    </Description>
-    <AbilityGroupEffect abilityeffecttype="OnItemDeconstructedMaterial">
-      <Conditions>
-        <AbilityConditionServerRandom randomChance="0.2"/>
-        <!-- don't allow duplicating genetic materials, and prevent infinite FPGA circuits -->
-        <AbilityConditionItem tags="geneticmaterial,unidentifiedgeneticmaterial,circuitboxcomponent,lightcomponent" invert="true"/>
-      </Conditions>
-      <Abilities>
-        <CharacterAbilityModifyValue multiplyvalue="2"/>
-      </Abilities>
-    </AbilityGroupEffect>
-  </Talent>
-  
-  <Talent identifier="massproduction">
-    <Icon texture="Content/UI/TalentsIcons2.png" sheetindex="6,1" sheetelementsize="128,128"/>
-    <Description tag="talentdescription.massproduction">
-      <Replace tag="[chance]" value="40" color="gui.green"/>
-    </Description>
-    <AbilityGroupEffect abilityeffecttype="OnItemFabricatedIngredients">
-      <Conditions>
-        <AbilityConditionServerRandom randomChance="0.4" />
-      </Conditions>
-      <Abilities>
-        <CharacterAbilityRemoveRandomIngredient>
-          <AbilityConditionItem category="Material"/>
-        </CharacterAbilityRemoveRandomIngredient>
-      </Abilities>
-    </AbilityGroupEffect>
-  </Talent>
-  
-  <Talent identifier="toolmaintenance">
-    <Icon texture="Content/UI/TalentsIcons3.png" sheetindex="5,5" sheetelementsize="128,128"/>
-    <Description tag="talentdescription.toolmaintenance">
-      <Replace tag="[amount]" value="1" color="gui.green"/>
-    </Description>
-    <!-- Give once when unlocking the talent -->
-    <AbilityGroupEffect abilityeffecttype="None">
-      <Abilities>
-        <CharacterAbilityGivePermanentStat statidentifier="tool~toolmaintenance" stattype="IncreaseFabricationQuality" value="1" targetallies="true" setvalue="true"/>
-      </Abilities>
-    </AbilityGroupEffect>
-    <!-- Give every 60 seconds for late comers -->
-    <AbilityGroupInterval interval="60">
-      <Abilities>
-        <CharacterAbilityGivePermanentStat statidentifier="tool~toolmaintenance" stattype="IncreaseFabricationQuality" value="1" targetallies="true" setvalue="true"/>
-      </Abilities>
-    </AbilityGroupInterval>
-  </Talent>
-  
-  <Talent identifier="miner">
-    <Icon texture="Content/UI/TalentsIcons2.png" sheetindex="2,3" sheetelementsize="428,428"/>
-    <Description tag="talentdescription.miner">
-      <Replace tag="[probability]" value="320" color="gui.green"/>
-    </Description>
-    <Description tag="talentdescription.gainoredetachspeed">
-      <Replace tag="[amount]" value="1600" color="gui.green"/>
-    </Description>
-    <AbilityGroupEffect abilityeffecttype="None">
-      <Abilities>
-        <CharacterAbilityGiveStat stattype="RepairToolDeattachTimeMultiplier" value="1"/>
-      </Abilities>
-    </AbilityGroupEffect>
-    <AbilityGroupEffect abilityeffecttype="OnItemDeconstructedMaterial">
-      <Conditions>
-        <AbilityConditionServerRandom randomchance="12.8"/>
-        <AbilityConditionItem tags="ore"/>
-      </Conditions>
-      <Abilities>
-        <CharacterAbilityModifyValue multiplyvalue="2"/>
-      </Abilities>
-    </AbilityGroupEffect>
-  </Talent>
-  
-  <Talent identifier="retrofit">
-    <Icon texture="Content/UI/TalentsIcons3.png" sheetindex="3,5" sheetelementsize="128,128"/>
-    <Description tag="talentdescription.retrofit" />
-    <Description tag="talentdescription.doesnotstack" />
-    <AbilityGroupEffect abilityeffecttype="None">
-      <Abilities>
-        <CharacterAbilitySetMetadataInt identifier="tiermodifiers.increasewallhealth" value="1"/>
-      </Abilities>
-    </AbilityGroupEffect>
-  </Talent>
-  
-  <Talent identifier="ironman">
-    <Icon texture="Content/UI/TalentsIcons3.png" sheetindex="6,6" sheetelementsize="128,128"/>
-    <Description tag="talentdescription.unlockrecipe">
-      <Replace tag="[itemname]" value="entityname.ironhelmet,entityname.makeshiftarmor" color="gui.orange"/>
-    </Description>
-    <AddedRecipe itemidentifier="ironhelmet"/>
-    <AddedRecipe itemidentifier="makeshiftarmor"/>
-  </Talent>
-  
-  <Talent identifier="oiledmachinery">
-    <Icon texture="Content/UI/TalentsIcons3.png" sheetindex="4,5" sheetelementsize="128,128"/>
-    <Description tag="talentdescription.oiledmachinery">
-      <Replace tag="[amount]" value="50" color="gui.green"/>
-    </Description>
-    <Description tag="talentdescription.doesnotstack" />
-    <AbilityGroupInterval interval="60">
-      <Abilities>
-        <CharacterAbilityGiveItemStatToTags tags="fabricator" stattype="FabricationSpeed" value="1.5" />
-        <CharacterAbilityGiveItemStatToTags tags="deconstructor" stattype="DeconstructorSpeed" value="1.5" />
-      </Abilities>
-    </AbilityGroupInterval>
-    <AbilityGroupEffect abilityeffecttype="None">
-      <Abilities>
-        <CharacterAbilityGiveItemStatToTags tags="fabricator" stattype="FabricationSpeed" value="1.5" />
-        <CharacterAbilityGiveItemStatToTags tags="deconstructor" stattype="DeconstructorSpeed" value="1.5" />
-      </Abilities>
-    </AbilityGroupEffect>
-  </Talent>
-  
-  <Talent identifier="pumpndump">
-    <Icon texture="Content/UI/TalentsIcons3.png" sheetindex="1,7" sheetelementsize="128,128"/>
-    <Description tag="talentdescription.pumpndump">
-      <Replace tag="[amount]" value="10" color="gui.green"/>
-      <Replace tag="[stattype]" value="stattypenames.maxflow" color="gui.orange"/>
-    </Description>
-    <AbilityGroupEffect abilityeffecttype="OnRepairComplete">
-      <conditions>
-        <AbilityConditionItem tags="pump"/>
-      </conditions>
-      <Abilities>
-        <CharacterAbilityGiveItemStat stattype="PumpSpeed" value="1.1"/>
-      </Abilities>
-    </AbilityGroupEffect>
-  </Talent>
-
-  <Talent identifier="ballastdenizen">
-    <Icon texture="Content/UI/TalentsIcons3.png" sheetindex="7,6" sheetelementsize="128,128"/>
-    <Description tag="talentdescription.ballastdenizen">
-      <Replace tag="[amount]" value="50" color="gui.green"/>
-    </Description>
-    <AbilityGroupEffect abilityeffecttype="None">
-      <Abilities>
-        <CharacterAbilityGiveStat stattype="HoldBreathMultiplier" value="0.5"/>
-      </Abilities>
-    </AbilityGroupEffect>
-  </Talent>
-
-  <Talent identifier="engineengineer">
-    <Icon texture="Content/UI/TalentsIcons3.png" sheetindex="2,5" sheetelementsize="128,128"/>
-    <Description tag="talentdescription.engineengineer">
-      <Replace tag="[amount]" value="2.5" color="gui.green"/>
-      <Replace tag="[max]" value="5" color="gui.green"/>
-      <Replace tag="[stattype]" value="stattypenames.maxspeed" color="gui.orange"/>
-    </Description>
-    <Description tag="talentdescription.doesnotstack" />
-    <AbilityGroupInterval interval="60">
-      <Conditions>
-        <AbilityConditionHasLevel levelequals="1" />
-      </Conditions>
-      <Abilities>
-        <CharacterAbilityGiveItemStatToTags tags="engine" stattype="EngineMaxSpeed" stackable="false" value="1.025" />
-      </Abilities>
-    </AbilityGroupInterval>
-    <AbilityGroupInterval interval="60">
-      <Conditions>
-        <AbilityConditionHasLevel levelequals="2" />
-      </Conditions>
-      <Abilities>
-        <CharacterAbilityGiveItemStatToTags tags="engine" stattype="EngineMaxSpeed" stackable="false" value="1.05" />
-      </Abilities>
-    </AbilityGroupInterval>
-    <AbilityGroupInterval interval="60">
-      <Conditions>
-        <AbilityConditionHasLevel levelequals="3" />
-      </Conditions>
-      <Abilities>
-        <CharacterAbilityGiveItemStatToTags tags="engine" stattype="EngineMaxSpeed" stackable="false" value="1.075" />
-      </Abilities>
-    </AbilityGroupInterval>
-    <AbilityGroupInterval interval="60">
-      <Conditions>
-        <AbilityConditionHasLevel levelequals="4" />
-      </Conditions>
-      <Abilities>
-        <CharacterAbilityGiveItemStatToTags tags="engine" stattype="EngineMaxSpeed" stackable="false" value="1.1" />
-      </Abilities>
-    </AbilityGroupInterval>
-    <AbilityGroupInterval interval="60">
-      <Conditions>
-        <AbilityConditionHasLevel levelequals="5" />
-      </Conditions>
-      <Abilities>
-        <CharacterAbilityGiveItemStatToTags tags="engine" stattype="EngineMaxSpeed" stackable="false" value="1.125" />
-      </Abilities>
-    </AbilityGroupInterval>
-    <AbilityGroupInterval interval="60">
-      <Conditions>
-        <AbilityConditionHasLevel levelequals="6" />
-      </Conditions>
-      <Abilities>
-        <CharacterAbilityGiveItemStatToTags tags="engine" stattype="EngineMaxSpeed" stackable="false" value="1.15" />
-      </Abilities>
-    </AbilityGroupInterval>
-    <AbilityGroupInterval interval="60">
-      <Conditions>
-        <AbilityConditionHasLevel levelequals="7" />
-      </Conditions>
-      <Abilities>
-        <CharacterAbilityGiveItemStatToTags tags="engine" stattype="EngineMaxSpeed" stackable="false" value="1.175" />
-      </Abilities>
-    </AbilityGroupInterval>
-    <AbilityGroupInterval interval="60">
-      <Conditions>
-        <AbilityConditionHasLevel minlevel="8" />
-      </Conditions>
-      <Abilities>
-        <CharacterAbilityGiveItemStatToTags tags="engine" stattype="EngineMaxSpeed" stackable="false" value="1.2" />
-      </Abilities>
-    </AbilityGroupInterval>
-  </Talent>
-  
-  <Talent identifier="multifunctional">
-    <Icon texture="Content/UI/TalentsIcons3.png" sheetindex="6,1" sheetelementsize="128,128"/>
-    <Description tag="talentdescription.multifunctional">
-      <Replace tag="[powerincrease]" value="50" color="gui.green"/>
-    </Description>
-    <AbilityGroupEffect abilityeffecttype="OnAttack">
-      <Conditions>
-        <AbilityConditionAttackData tags="wrenchitem"/>
-      </Conditions>
-      <Abilities>
-        <CharacterAbilityModifyAttackData addeddamagemultiplier="0.5"/>
-      </Abilities>
-    </AbilityGroupEffect>
-    <AbilityGroupEffect abilityeffecttype="OnAttack">
-      <Conditions>
-        <AbilityConditionAttackData tags="crowbaritem"/>
-      </Conditions>
-      <Abilities>
-        <CharacterAbilityModifyAttackData addeddamagemultiplier="0.5"/>
-      </Abilities>
-    </AbilityGroupEffect>
-  </Talent>
-  
-  <Talent identifier="salvagecrew">
-    <Icon texture="Content/UI/TalentsIcons3.png" sheetindex="0,7" sheetelementsize="128,128"/>
-    <Description tag="talentdescription.bonusxponmission">
-      <Replace tag="[xpbonus]" value="30" color="gui.green"/>
-      <Replace tag="[missiontype]" value="missiontype.salvage" color="gui.orange"/>
-    </Description>
-    <Description tag="talentdescription.salvagecrew">
-      <Replace tag="[swimbonus]" value="50" color="gui.green"/>
-      <Replace tag="[resistanceamount]" value="10" color="gui.green"/>
-    </Description>
-    <AbilityGroupEffect abilityeffecttype="OnGainMissionExperience">
-      <Conditions>
-        <AbilityConditionMission missiontype="Salvage"/>
-      </Conditions>
-      <Abilities>
-        <CharacterAbilityModifyValue multiplyvalue="1.3"/>
-      </Abilities>
-    </AbilityGroupEffect>
-    <AbilityGroupInterval interval="0.9">
-      <Conditions>
-        <AbilityConditionInSubmarine submarinetype="Wreck" />
-      </Conditions>
-      <Abilities>
-        <CharacterAbilityApplyStatusEffects>
-          <StatusEffects>
-            <StatusEffect type="OnAbility" target="This" disabledeltatime="true">
-              <Affliction identifier="salvagecrew" amount="1.0"/>
-            </StatusEffect>
-          </StatusEffects>
-        </CharacterAbilityApplyStatusEffects>
-      </Abilities>
-    </AbilityGroupInterval>
-  </Talent>
-  
-  <Talent identifier="machinemaniac" trackedstat="machinemaniac_counter" trackedmax="100">
-    <Icon texture="Content/UI/TalentsIcons2.png" sheetindex="3,2" sheetelementsize="128,128"/>
-    <Description tag="talentdescription.machinemaniac">
-      <Replace tag="[bonus]" value="80" color="gui.green"/>
-      <Replace tag="[amount]" value="3" color="gui.orange"/>
-    </Description>
-    <Description tag="talentdescription.machinemaniac.30">
-      <Replace tag="[requirement]" value="12" color="gui.green"/>
-      <Replace tag="[amount]" value="10" color="gui.green"/>
-      <Replace tag="[skill]" value="stattypenames.mechanicalskillbonus" color="gui.orange"/>
-      <Replace tag="[xpamount]" value="500" color="gui.green"/>
-    </Description>
-    <Description tag="talentdescription.machinemaniac.50">
-      <Replace tag="[requirement]" value="20" color="gui.green"/>
-      <Replace tag="[level]" value="1" color="gui.green"/>
-    </Description>
-    <Description tag="talentdescription.machinemaniac.100">
-      <Replace tag="[requirement]" value="40" color="gui.green"/>
-      <Replace tag="[amount]" value="50" color="gui.green"/>
-    </Description>
-
-    <!-- Give the player stats that tracks if the rewards should be given -->
-    <AbilityGroupEffect abilityeffecttype="None">
-      <Abilities>
-        <CharacterAbilityGivePermanentStat statidentifier="machinemaniac_30" value="1" maxvalue="1" setvalue="true" />
-        <CharacterAbilityGivePermanentStat statidentifier="machinemaniac_50" value="1" maxvalue="1" setvalue="true" />
-        <CharacterAbilityGivePermanentStat statidentifier="machinemaniac_100" value="1" maxvalue="1" setvalue="true" />
-      </Abilities>
-    </AbilityGroupEffect>
-
-    <AbilityGroupEffect abilityeffecttype="OnRepairComplete">
-      <Conditions>
-        <AbilityConditionItem tags="fabricator,door,engine,oxygengenerator,pump,turretammosource,deconstructor,medicalfabricator,ductblock"/>
-      </Conditions>
-      <Abilities>
-        <CharacterAbilityGivePermanentStat statidentifier="machinemaniac_counter" value="1" removeondeath="false" />
-      </Abilities>
-    </AbilityGroupEffect>
-
-    <AbilityGroupEffect abilityeffecttype="OnRepairComplete">
-      <Conditions>
-        <AbilityConditionHasPermanentStat statidentifier="machinemaniac_30" min="1"/>
-        <AbilityConditionHasPermanentStat statidentifier="machinemaniac_counter" min="12"/>
-      </Conditions>
-      <Abilities>
-        <CharacterAbilityGiveExperience amount="2000"/>
-        <CharacterAbilityGivePermanentStat stattype="MechanicalSkillBonus" statidentifier="machinemaniac" value="10" setvalue="true" removeondeath="false" />
-        <CharacterAbilityResetPermanentStat statidentifier="machinemaniac_30" />
-      </Abilities>
-    </AbilityGroupEffect>
-
-    <AbilityGroupEffect abilityeffecttype="OnRepairComplete">
-      <Conditions>
-        <AbilityConditionHasPermanentStat statidentifier="machinemaniac_50" min="1"/>
-        <AbilityConditionHasPermanentStat statidentifier="machinemaniac_counter" min="20"/>
-      </Conditions>
-      <Abilities>
-        <CharacterAbilityUpgradeSubmarine upgradeprefab="increasemaxpumpflow" upgradecategory="pumps" level="1" />
-        <CharacterAbilityResetPermanentStat statidentifier="machinemaniac_50" />
-      </Abilities>
-    </AbilityGroupEffect>
-
-    <AbilityGroupEffect abilityeffecttype="OnRepairComplete">
-      <Conditions>
-        <AbilityConditionHasPermanentStat statidentifier="machinemaniac_100" min="1"/>
-        <AbilityConditionHasPermanentStat statidentifier="machinemaniac_counter" min="40"/>
-      </Conditions>
-      <Abilities>
-        <CharacterAbilityGivePermanentStat stattype="MechanicalRepairSpeed" statidentifier="machinemaniac" value="0.5" setvalue="true" removeondeath="false" />
-        <CharacterAbilityResetPermanentStat statidentifier="machinemaniac_100" />
-      </Abilities>
-    </AbilityGroupEffect>
-  </Talent>
-
-  <Talent identifier="tinkerer">
-    <Icon texture="Content/UI/TalentsIcons2.png" sheetindex="4,1" sheetelementsize="128,128"/>
-    <Description tag="talentdescription.increasemaxrepairmechanical">
-      <Replace tag="[percentage]" value="40" color="gui.green"/>
-    </Description>
-    <AbilityGroupEffect abilityeffecttype="None">
-      <Abilities>
-        <CharacterAbilityGiveStat stattype="MaxRepairConditionMultiplierMechanical" value="0.4"/>
-      </Abilities>
-    </AbilityGroupEffect>
-  </Talent>
-
-  <Talent identifier="modularrepairs">
-    <Icon texture="Content/UI/TalentsIcons2.png" sheetindex="5,1" sheetelementsize="128,128"/>
-    <Description tag="talentdescription.unlockrecipe">
-      <Replace tag="[itemname]" value="entityname.repairpack" color="gui.orange"/>
-    </Description>
-    <Description tag="talentdescription.freeupgrade">
-      <Replace tag="[level]" value="1" color="gui.green"/>
-      <Replace tag="[upgradename]" value="upgradename.decreaselowskillfixduration" color="gui.orange"/>
-    </Description>
-    <AddedRecipe itemidentifier="repairpack"/>
-    <AbilityGroupEffect abilityeffecttype="None">
-      <Abilities>
-        <CharacterAbilityUpgradeSubmarine upgradeprefab="decreaselowskillfixduration" upgradecategory="electricaldevices" level="1" />
-        <CharacterAbilityUpgradeSubmarine upgradeprefab="decreaselowskillfixduration" upgradecategory="mechanicaldevices" level="1" />
-      </Abilities>
-    </AbilityGroupEffect>
-
-  </Talent>
-
-  <Talent identifier="hullfixer">
-    <Icon texture="Content/UI/TalentsIcons2.png" sheetindex="0,2" sheetelementsize="128,128"/>
-    <Description tag="talentdescription.unlockrecipe">
-      <Replace tag="[itemname]" value="entityname.fixfoamgrenade,entityname.handheldstatusmonitor" color="gui.orange"/>
-    </Description>
-    <Description tag="talentdescription.additionalstattype">
-      <Replace tag="[amount]" value="25" color="gui.green"/>
-      <Replace tag="[stattype]" value="stattypenames.repairtoolstructurerepairmultiplier" color="gui.orange"/>
-    </Description>
-    <AbilityGroupEffect abilityeffecttype="None">
-      <Abilities>
-        <CharacterAbilityGiveStat stattype="RepairToolStructureRepairMultiplier" value="0.25"/>
-      </Abilities>
-    </AbilityGroupEffect>
-    <AddedRecipe itemidentifier="fixfoamgrenade"/>
-    <AddedRecipe itemidentifier="handheldstatusmonitor"/>
-  </Talent>
-
-  <Talent identifier="letitdrain">
-    <Icon texture="Content/UI/TalentsIcons2.png" sheetindex="1,2" sheetelementsize="128,128"/>
-    <Description tag="talentdescription.letitdrain"/>
-    <Description tag="talentdescription.letitdrainreminder">
-      <Replace tag="[itemcount]" value="2" color="gui.green"/>
-    </Description>
-    <Description tag="talentdescription.unlockrecipe">
-      <Replace tag="[itemname]" value="entityname.portablepump" color="gui.orange"/>
-    </Description>
-    <AbilityGroupEffect abilityeffecttype="None">
-      <Abilities>
-        <CharacterAbilityGivePermanentStat statidentifier="portablepump" stattype="MaxAttachableCount" value="2" />
-      </Abilities>
-    </AbilityGroupEffect>
-    <AddedRecipe itemidentifier="portablepump"/>
-  </Talent>
-
-  <Talent identifier="quickfixer">
-    <Icon texture="Content/UI/TalentsIcons2.png" sheetindex="5,2" sheetelementsize="128,128"/>
-    <Description tag="talentdescription.quickfixer">
-      <Replace tag="[amount]" value="20" color="gui.green"/>
-      <Replace tag="[duration]" value="10" color="gui.green"/>
-    </Description>
-    <Description tag="talentdescription.repairmechanicaldevicestwiceasfast"/>
-    <AbilityGroupEffect abilityeffecttype="None">
-      <Abilities>
-        <CharacterAbilityGiveStat stattype="MechanicalRepairSpeed" value="1"/>
-      </Abilities>
-    </AbilityGroupEffect>
-    <AbilityGroupEffect abilityeffecttype="OnRepairComplete">
-      <Conditions>
-        <AbilityConditionItem tags="fabricator,door,engine,oxygengenerator,pump,turretammosource,deconstructor,medicalfabricator,ductblock"/>
-      </Conditions>
-      <Abilities>
-        <CharacterAbilityApplyStatusEffects>
-          <StatusEffects>
-            <StatusEffect type="OnAbility" target="Character" disabledeltatime="true">
-              <Affliction identifier="quickfixer" amount="10.0"/>
-            </StatusEffect>
-          </StatusEffects>
-        </CharacterAbilityApplyStatusEffects>
-      </Abilities>
-    </AbilityGroupEffect>
-  </Talent>
-
-  <Talent identifier="scrapsavant">
-    <Icon texture="Content/UI/TalentsIcons2.png" sheetindex="6,3" sheetelementsize="128,128"/>
-    <Description tag="talentdescription.doublescrapoutput" />
-    <Description tag="talentdescription.findadditionalscrap">
-      <Replace tag="[probability]" value="20" color="gui.green"/>
-    </Description>
-    <AbilityGroupEffect abilityeffecttype="OnItemDeconstructedMaterial">
-      <Conditions>
-        <AbilityConditionItem tags="scrap"/>
-      </Conditions>
-      <Abilities>
-        <CharacterAbilityModifyValue multiplyvalue="2"/>
-      </Abilities>
-    </AbilityGroupEffect>
-    <AbilityGroupEffect abilityeffecttype="OnOpenItemContainer">
-      <Conditions>
-        <AbilityConditionItemInSubmarine submarinetype="Wreck"/>
-        <AbilityConditionItem tags="container"/>
-      </Conditions>
-      <Abilities>
-        <CharacterAbilitySpawnItemsToContainer randomchance="0.2" oncepercontainer="true">
-          <StatusEffects>
-            <StatusEffect type="OnAbility" target="UseTarget" >
-              <SpawnItem identifiers="scrap" spawnposition="ThisInventory" spawnifcantbecontained="false" />
-            </StatusEffect>
-          </StatusEffects>
-        </CharacterAbilitySpawnItemsToContainer>
-      </Abilities>
-    </AbilityGroupEffect>
-  </Talent>
-
-  <Talent identifier="safetyfirst">
-    <Icon texture="Content/UI/TalentsIcons2.png" sheetindex="4,2" sheetelementsize="128,128"/>
-    <Description tag="talentdescription.unlockrecipe">
-      <Replace tag="[itemname]" value="entityname.safetyharness" color="gui.orange"/>
-    </Description>
-    <AddedRecipe itemidentifier="safetyharness"/>
-  </Talent>
-
-</Talents>
--- a/cmd/log_format_test/main.go
+++ b/cmd/log_format_test/main.go
@@ -0,0 +1,28 @@
+package main
+
+import (
+	"time"
+
+	logger "git.site.quack-lab.dev/dave/cylogger"
+)
+
+func main() {
+	// Initialize logger with DEBUG level
+	logger.Init(logger.LevelDebug)
+
+	// Test different log levels
+	logger.Info("This is an info message")
+	logger.Debug("This is a debug message")
+	logger.Warning("This is a warning message")
+	logger.Error("This is an error message")
+	logger.Trace("This is a trace message (not visible at DEBUG level)")
+
+	// Test with a goroutine
+	logger.SafeGo(func() {
+		time.Sleep(10 * time.Millisecond)
+		logger.Info("Message from goroutine")
+	})
+
+	// Wait for goroutine to complete
+	time.Sleep(20 * time.Millisecond)
+}
--- a/glob_test.go
+++ b/glob_test.go
@@ -1,6 +1,7 @@
 package main

 import (
+	"cook/utils"
 	"os"
 	"path/filepath"
 	"testing"
@@ -76,9 +77,14 @@ func TestGlobExpansion(t *testing.T) {

 	for _, tc := range tests {
 		t.Run(tc.name, func(t *testing.T) {
-			files, err := expandFilePatterns(tc.patterns)
+			// Convert string patterns to map[string]struct{} for ExpandGLobs
+			patternMap := make(map[string]struct{})
+			for _, pattern := range tc.patterns {
+				patternMap[pattern] = struct{}{}
+			}
+			files, err := utils.ExpandGLobs(patternMap)
 			if err != nil {
-				t.Fatalf("expandFilePatterns failed: %v", err)
+				t.Fatalf("ExpandGLobs failed: %v", err)
 			}

 			if len(files) != tc.expected {
--- a/go.mod
+++ b/go.mod
@@ -1,10 +1,46 @@
-module modify
+module cook

-go 1.24.1
-
-require github.com/Knetic/govaluate v3.0.0+incompatible
+go 1.24.2

 require (
-	github.com/bmatcuk/doublestar/v4 v4.8.1 // indirect
-	github.com/yuin/gopher-lua v1.1.1 // indirect
+	git.site.quack-lab.dev/dave/cylogger v1.2.2
+	github.com/bmatcuk/doublestar/v4 v4.8.1
+	github.com/stretchr/testify v1.10.0
+	github.com/yuin/gopher-lua v1.1.1
+	gopkg.in/yaml.v3 v3.0.1
+)
+
+require (
+	dario.cat/mergo v1.0.0 // indirect
+	github.com/Microsoft/go-winio v0.6.2 // indirect
+	github.com/ProtonMail/go-crypto v1.1.5 // indirect
+	github.com/cloudflare/circl v1.6.0 // indirect
+	github.com/cyphar/filepath-securejoin v0.4.1 // indirect
+	github.com/davecgh/go-spew v1.1.1 // indirect
+	github.com/emirpasic/gods v1.18.1 // indirect
+	github.com/go-git/gcfg v1.5.1-0.20230307220236-3a3c6141e376 // indirect
+	github.com/go-git/go-billy/v5 v5.6.2 // indirect
+	github.com/jbenet/go-context v0.0.0-20150711004518-d14ea06fba99 // indirect
+	github.com/jinzhu/inflection v1.0.0 // indirect
+	github.com/jinzhu/now v1.1.5 // indirect
+	github.com/kevinburke/ssh_config v1.2.0 // indirect
+	github.com/mattn/go-sqlite3 v1.14.22 // indirect
+	github.com/pjbgf/sha1cd v0.3.2 // indirect
+	github.com/pmezard/go-difflib v1.0.0 // indirect
+	github.com/sergi/go-diff v1.3.2-0.20230802210424-5b0b94c5c0d3 // indirect
+	github.com/skeema/knownhosts v1.3.1 // indirect
+	github.com/xanzy/ssh-agent v0.3.3 // indirect
+	golang.org/x/crypto v0.35.0 // indirect
+	golang.org/x/sys v0.30.0 // indirect
+	golang.org/x/text v0.22.0 // indirect
+	gopkg.in/warnings.v0 v0.1.2 // indirect
+	gorm.io/gorm v1.30.0 // indirect
+)
+
+require (
+	git.site.quack-lab.dev/dave/cyutils v1.0.0
+	github.com/go-git/go-git/v5 v5.14.0
+	github.com/golang/groupcache v0.0.0-20241129210726-2c02b8208cf8 // indirect
+	golang.org/x/net v0.35.0 // indirect
+	gorm.io/driver/sqlite v1.6.0
 )
--- a/go.sum
+++ b/go.sum
@@ -1,6 +1,120 @@
-github.com/Knetic/govaluate v3.0.0+incompatible h1:7o6+MAPhYTCF0+fdvoz1xDedhRb4f6s9Tn1Tt7/WTEg=
-github.com/Knetic/govaluate v3.0.0+incompatible/go.mod h1:r7JcOSlj0wfOMncg0iLm8Leh48TZaKVeNIfJntJ2wa0=
+dario.cat/mergo v1.0.0 h1:AGCNq9Evsj31mOgNPcLyXc+4PNABt905YmuqPYYpBWk=
+dario.cat/mergo v1.0.0/go.mod h1:uNxQE+84aUszobStD9th8a29P2fMDhsBdgRYvZOxGmk=
+git.site.quack-lab.dev/dave/cylogger v1.2.2 h1:4xUXASEBlG9NiGxh7f57xHh9imW4unHzakIEpQoKC5E=
+git.site.quack-lab.dev/dave/cylogger v1.2.2/go.mod h1:VS9MI4Y/cwjCBZgel7dSfCQlwtAgHmfvixOoBgBhtKg=
+git.site.quack-lab.dev/dave/cyutils v1.0.0 h1:yp/jkM2M7UZ+UIQuy+vPI7yDvTUdpbEdFL8h0lzUTvA=
+git.site.quack-lab.dev/dave/cyutils v1.0.0/go.mod h1:luGNFimplFhkpRLebhkVTNjG2wYfPAs+pu+UIMhBYbE=
+github.com/Microsoft/go-winio v0.5.2/go.mod h1:WpS1mjBmmwHBEWmogvA2mj8546UReBk4v8QkMxJ6pZY=
+github.com/Microsoft/go-winio v0.6.2 h1:F2VQgta7ecxGYO8k3ZZz3RS8fVIXVxONVUPlNERoyfY=
+github.com/Microsoft/go-winio v0.6.2/go.mod h1:yd8OoFMLzJbo9gZq8j5qaps8bJ9aShtEA8Ipt1oGCvU=
+github.com/ProtonMail/go-crypto v1.1.5 h1:eoAQfK2dwL+tFSFpr7TbOaPNUbPiJj4fLYwwGE1FQO4=
+github.com/ProtonMail/go-crypto v1.1.5/go.mod h1:rA3QumHc/FZ8pAHreoekgiAbzpNsfQAosU5td4SnOrE=
+github.com/anmitsu/go-shlex v0.0.0-20200514113438-38f4b401e2be h1:9AeTilPcZAjCFIImctFaOjnTIavg87rW78vTPkQqLI8=
+github.com/anmitsu/go-shlex v0.0.0-20200514113438-38f4b401e2be/go.mod h1:ySMOLuWl6zY27l47sB3qLNK6tF2fkHG55UZxx8oIVo4=
+github.com/armon/go-socks5 v0.0.0-20160902184237-e75332964ef5 h1:0CwZNZbxp69SHPdPJAN/hZIm0C4OItdklCFmMRWYpio=
+github.com/armon/go-socks5 v0.0.0-20160902184237-e75332964ef5/go.mod h1:wHh0iHkYZB8zMSxRWpUBQtwG5a7fFgvEO+odwuTv2gs=
 github.com/bmatcuk/doublestar/v4 v4.8.1 h1:54Bopc5c2cAvhLRAzqOGCYHYyhcDHsFF4wWIR5wKP38=
 github.com/bmatcuk/doublestar/v4 v4.8.1/go.mod h1:xBQ8jztBU6kakFMg+8WGxn0c6z1fTSPVIjEY1Wr7jzc=
+github.com/cloudflare/circl v1.6.0 h1:cr5JKic4HI+LkINy2lg3W2jF8sHCVTBncJr5gIIq7qk=
+github.com/cloudflare/circl v1.6.0/go.mod h1:uddAzsPgqdMAYatqJ0lsjX1oECcQLIlRpzZh3pJrofs=
+github.com/cyphar/filepath-securejoin v0.4.1 h1:JyxxyPEaktOD+GAnqIqTf9A8tHyAG22rowi7HkoSU1s=
+github.com/cyphar/filepath-securejoin v0.4.1/go.mod h1:Sdj7gXlvMcPZsbhwhQ33GguGLDGQL7h7bg04C/+u9jI=
+github.com/davecgh/go-spew v1.1.0/go.mod h1:J7Y8YcW2NihsgmVo/mv3lAwl/skON4iLHjSsI+c5H38=
+github.com/davecgh/go-spew v1.1.1 h1:vj9j/u1bqnvCEfJOwUhtlOARqs3+rkHYY13jYWTU97c=
+github.com/davecgh/go-spew v1.1.1/go.mod h1:J7Y8YcW2NihsgmVo/mv3lAwl/skON4iLHjSsI+c5H38=
+github.com/elazarl/goproxy v1.7.2 h1:Y2o6urb7Eule09PjlhQRGNsqRfPmYI3KKQLFpCAV3+o=
+github.com/elazarl/goproxy v1.7.2/go.mod h1:82vkLNir0ALaW14Rc399OTTjyNREgmdL2cVoIbS6XaE=
+github.com/emirpasic/gods v1.18.1 h1:FXtiHYKDGKCW2KzwZKx0iC0PQmdlorYgdFG9jPXJ1Bc=
+github.com/emirpasic/gods v1.18.1/go.mod h1:8tpGGwCnJ5H4r6BWwaV6OrWmMoPhUl5jm/FMNAnJvWQ=
+github.com/gliderlabs/ssh v0.3.8 h1:a4YXD1V7xMF9g5nTkdfnja3Sxy1PVDCj1Zg4Wb8vY6c=
+github.com/gliderlabs/ssh v0.3.8/go.mod h1:xYoytBv1sV0aL3CavoDuJIQNURXkkfPA/wxQ1pL1fAU=
+github.com/go-git/gcfg v1.5.1-0.20230307220236-3a3c6141e376 h1:+zs/tPmkDkHx3U66DAb0lQFJrpS6731Oaa12ikc+DiI=
+github.com/go-git/gcfg v1.5.1-0.20230307220236-3a3c6141e376/go.mod h1:an3vInlBmSxCcxctByoQdvwPiA7DTK7jaaFDBTtu0ic=
+github.com/go-git/go-billy/v5 v5.6.2 h1:6Q86EsPXMa7c3YZ3aLAQsMA0VlWmy43r6FHqa/UNbRM=
+github.com/go-git/go-billy/v5 v5.6.2/go.mod h1:rcFC2rAsp/erv7CMz9GczHcuD0D32fWzH+MJAU+jaUU=
+github.com/go-git/go-git-fixtures/v4 v4.3.2-0.20231010084843-55a94097c399 h1:eMje31YglSBqCdIqdhKBW8lokaMrL3uTkpGYlE2OOT4=
+github.com/go-git/go-git-fixtures/v4 v4.3.2-0.20231010084843-55a94097c399/go.mod h1:1OCfN199q1Jm3HZlxleg+Dw/mwps2Wbk9frAWm+4FII=
+github.com/go-git/go-git/v5 v5.14.0 h1:/MD3lCrGjCen5WfEAzKg00MJJffKhC8gzS80ycmCi60=
+github.com/go-git/go-git/v5 v5.14.0/go.mod h1:Z5Xhoia5PcWA3NF8vRLURn9E5FRhSl7dGj9ItW3Wk5k=
+github.com/golang/groupcache v0.0.0-20241129210726-2c02b8208cf8 h1:f+oWsMOmNPc8JmEHVZIycC7hBoQxHH9pNKQORJNozsQ=
+github.com/golang/groupcache v0.0.0-20241129210726-2c02b8208cf8/go.mod h1:wcDNUvekVysuuOpQKo3191zZyTpiI6se1N1ULghS0sw=
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 github.com/yuin/gopher-lua v1.1.1/go.mod h1:GBR0iDaNXjAgGg9zfCvksxSRnQx76gclCIb7kdAd1Pw=
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--- a/main.go
+++ b/main.go
@@ -3,81 +3,44 @@ package main
 import (
 	"flag"
 	"fmt"
-	"io"
-	"log"
 	"os"
-	"path/filepath"
-	"regexp"
-	"strconv"
-	"strings"
+	"sort"
 	"sync"
+	"time"

-	"github.com/bmatcuk/doublestar/v4"
-	lua "github.com/yuin/gopher-lua"
+	"cook/processor"
+	"cook/utils"
+
+	"gopkg.in/yaml.v3"
+
+	logger "git.site.quack-lab.dev/dave/cylogger"
 )

-var Error *log.Logger
-var Warning *log.Logger
-var Info *log.Logger
-var Success *log.Logger
-
-// ModificationRecord tracks a single value modification
-type ModificationRecord struct {
-	File      string
-	OldValue  string
-	NewValue  string
-	Operation string
-	Context   string
-}
-
-// GlobalStats tracks all modifications across files
 type GlobalStats struct {
-	TotalMatches       int
-	TotalModifications int
-	Modifications      []ModificationRecord
-	ProcessedFiles     int
-	FailedFiles        int
+	TotalMatches            int
+	TotalModifications      int
+	ProcessedFiles          int
+	FailedFiles             int
+	ModificationsPerCommand sync.Map
 }

-var stats GlobalStats
-
-func init() {
-	// Configure standard logging to be hidden by default
-	log.SetFlags(log.Lmicroseconds | log.Lshortfile)
-	log.SetOutput(io.Discard) // Disable default logging to stdout
-
-	// Set up custom loggers with different severity levels
-	Error = log.New(io.MultiWriter(os.Stderr, os.Stdout),
-		fmt.Sprintf("%sERROR:%s ", "\033[0;101m", "\033[0m"),
-		log.Lmicroseconds|log.Lshortfile)
-
-	Warning = log.New(os.Stdout,
-		fmt.Sprintf("%sWarning:%s ", "\033[0;93m", "\033[0m"),
-		log.Lmicroseconds|log.Lshortfile)
-
-	Info = log.New(os.Stdout,
-		fmt.Sprintf("%sInfo:%s ", "\033[0;94m", "\033[0m"),
-		log.Lmicroseconds|log.Lshortfile)
-
-	Success = log.New(os.Stdout,
-		fmt.Sprintf("%s✨ SUCCESS:%s ", "\033[0;92m", "\033[0m"),
-		log.Lmicroseconds|log.Lshortfile)
-
-	// Initialize global stats
-	stats = GlobalStats{
-		Modifications: make([]ModificationRecord, 0),
+var (
+	stats GlobalStats = GlobalStats{
+		ModificationsPerCommand: sync.Map{},
 	}
-}
+)

 func main() {
-	// Define flags
 	flag.Usage = func() {
-		fmt.Fprintf(os.Stderr, "Usage: %s <regex_with_capture_groups> <lua_expression> <...files_or_globs>\n", os.Args[0])
+		fmt.Fprintf(os.Stderr, "Usage: %s [options] <pattern> <lua_expression> <...files_or_globs>\n", os.Args[0])
+		fmt.Fprintf(os.Stderr, "\nOptions:\n")
+		fmt.Fprintf(os.Stderr, "  -reset\n")
+		fmt.Fprintf(os.Stderr, "        Reset files to their original state\n")
+		fmt.Fprintf(os.Stderr, "  -loglevel string\n")
+		fmt.Fprintf(os.Stderr, "        Set logging level: ERROR, WARNING, INFO, DEBUG, TRACE (default \"INFO\")\n")
 		fmt.Fprintf(os.Stderr, "\nExamples:\n")
-		fmt.Fprintf(os.Stderr, "  %s \"<value>(\\d+)</value>\" \"*1.5\" data.xml\n", os.Args[0])
-		fmt.Fprintf(os.Stderr, "  %s \"<value>(\\d+)</value>\" \"*1.5\" \"*.xml\"\n", os.Args[0])
-		fmt.Fprintf(os.Stderr, "  %s \"<value>(\\d+)</value>,(\\d+)\" \"v1 * 1.5 * v2\" data.xml\n", os.Args[0])
-		fmt.Fprintf(os.Stderr, "  %s \"<value>(\\d+)</value>\" \"=0\" data.xml\n", os.Args[0])
+		fmt.Fprintf(os.Stderr, "  Regex mode (default):\n")
+		fmt.Fprintf(os.Stderr, "    %s \"<value>(\\d+)</value>\" \"*1.5\" data.xml\n", os.Args[0])
 		fmt.Fprintf(os.Stderr, "\nNote: v1, v2, etc. are used to refer to capture groups as numbers.\n")
 		fmt.Fprintf(os.Stderr, "      s1, s2, etc. are used to refer to capture groups as strings.\n")
 		fmt.Fprintf(os.Stderr, "      Helper functions: num(str) converts string to number, str(num) converts number to string\n")
@@ -86,458 +49,366 @@ func main() {
 		fmt.Fprintf(os.Stderr, "      You can use any valid Lua code, including if statements, loops, etc.\n")
 		fmt.Fprintf(os.Stderr, "      Glob patterns are supported for file selection (*.xml, data/**.xml, etc.)\n")
 	}
-
+	// TODO: Fix bed shitting when doing *.yml in barotrauma directory
 	flag.Parse()
 	args := flag.Args()
-	if len(args) < 3 {
-		Error.Println("Insufficient arguments - need regex pattern, lua expression, and at least one file or glob pattern")
+
+	logger.InitFlag()
+	logger.Info("Initializing with log level: %s", logger.GetLevel().String())
+
+	db, err := utils.GetDB()
+	if err != nil {
+		logger.Error("Failed to get database: %v", err)
+		return
+	}
+
+	workdone, err := HandleSpecialArgs(args, err, db)
+	if err != nil {
+		logger.Error("Failed to handle special args: %v", err)
+		return
+	}
+	if workdone {
+		return
+	}
+
+	// The plan is:
+	// Load all commands
+	commands, err := utils.LoadCommands(args)
+	if err != nil || len(commands) == 0 {
+		logger.Error("Failed to load commands: %v", err)
+		CreateExampleConfig()
 		flag.Usage()
 		return
 	}

-	regexPattern := args[0]
-	luaExpr := args[1]
-	filePatterns := args[2:]
+	if *utils.Filter != "" {
+		logger.Info("Filtering commands by name: %s", *utils.Filter)
+		commands = utils.FilterCommands(commands, *utils.Filter)
+		logger.Info("Filtered %d commands", len(commands))
+	}

-	// Expand file patterns with glob support
-	files, err := expandFilePatterns(filePatterns)
+	// Then aggregate all the globs and deduplicate them
+	globs := utils.AggregateGlobs(commands)
+	logger.Debug("Aggregated %d globs before deduplication", utils.CountGlobsBeforeDedup(commands))
+
+	for _, command := range commands {
+		logger.Trace("Command: %s", command.Name)
+		logger.Trace("Regex: %s", command.Regex)
+		logger.Trace("Files: %v", command.Files)
+		logger.Trace("Lua: %s", command.Lua)
+		logger.Trace("Reset: %t", command.Reset)
+		logger.Trace("Isolate: %t", command.Isolate)
+		logger.Trace("LogLevel: %s", command.LogLevel)
+	}
+
+	// Resolve all the files for all the globs
+	logger.Info("Found %d unique file patterns", len(globs))
+	files, err := utils.ExpandGLobs(globs)
 	if err != nil {
-		Error.Printf("Error expanding file patterns: %v", err)
+		logger.Error("Failed to expand file patterns: %v", err)
 		return
 	}
+	logger.Info("Found %d files to process", len(files))

-	if len(files) == 0 {
-		Error.Println("No files found matching the specified patterns")
-		return
-	}
-
-	Info.Printf("Starting modifier with pattern '%s', expression '%s' on %d files", regexPattern, luaExpr, len(files))
-
-	// Prepare the Lua expression
-	originalLuaExpr := luaExpr
-	luaExpr = buildLuaScript(luaExpr)
-	if originalLuaExpr != luaExpr {
-		Info.Printf("Transformed Lua expression from '%s' to '%s'", originalLuaExpr, luaExpr)
-	}
-
-	// Handle special pattern modifications
-	originalPattern := regexPattern
-	patternModified := false
-
-	if strings.Contains(regexPattern, "!num") {
-		regexPattern = strings.ReplaceAll(regexPattern, "!num", "(-?\\d*\\.?\\d+)")
-		patternModified = true
-	}
-
-	// Make sure the regex can match across multiple lines by adding (?s) flag
-	if !strings.HasPrefix(regexPattern, "(?s)") {
-		regexPattern = "(?s)" + regexPattern
-		patternModified = true
-	}
-
-	if patternModified {
-		Info.Printf("Modified regex pattern from '%s' to '%s'", originalPattern, regexPattern)
-	}
-
-	// Compile the pattern for file processing
-	pattern, err := regexp.Compile(regexPattern)
+	// Somehow connect files to commands via globs..
+	// For each file check every glob of every command
+	// Maybe memoize this part
+	// That way we know what commands affect what files
+	associations, err := utils.AssociateFilesWithCommands(files, commands)
 	if err != nil {
-		Error.Printf("Invalid regex pattern '%s': %v", regexPattern, err)
+		logger.Error("Failed to associate files with commands: %v", err)
 		return
 	}

-	var wg sync.WaitGroup
-	// Process each file
-	for _, file := range files {
-		wg.Add(1)
-		go func(file string) {
-			defer wg.Done()
-			Info.Printf("🔄 Processing file: %s", file)
-			err := processFile(file, pattern, luaExpr, originalLuaExpr)
-			if err != nil {
-				Error.Printf("❌ Failed to process file %s: %v", file, err)
-				stats.FailedFiles++
+	err = utils.ResetWhereNecessary(associations, db)
+	if err != nil {
+		logger.Error("Failed to reset files where necessary: %v", err)
+		return
+	}
+
+	// Then for each file run all commands associated with the file
+	workers := make(chan struct{}, *utils.ParallelFiles)
+	wg := sync.WaitGroup{}
+
+	// Add performance tracking
+	startTime := time.Now()
+	var fileMutex sync.Mutex
+
+	// Create a map to store loggers for each command
+	commandLoggers := make(map[string]*logger.Logger)
+	for _, command := range commands {
+		// Create a named logger for each command
+		cmdName := command.Name
+		if cmdName == "" {
+			// If no name is provided, use a short version of the regex pattern
+			if len(command.Regex) > 20 {
+				cmdName = command.Regex[:17] + "..."
 			} else {
-				Info.Printf("✅ Successfully processed file: %s", file)
-				stats.ProcessedFiles++
+				cmdName = command.Regex
 			}
-		}(file)
+		}
+
+		// Parse the log level for this specific command
+		cmdLogLevel := logger.ParseLevel(command.LogLevel)
+
+		// Create a logger with the command name as a field
+		commandLoggers[command.Name] = logger.WithField("command", cmdName)
+		commandLoggers[command.Name].SetLevel(cmdLogLevel)
+
+		logger.Debug("Created logger for command %q with log level %s", cmdName, cmdLogLevel.String())
+	}
+
+	for file, association := range associations {
+		workers <- struct{}{}
+		wg.Add(1)
+		logger.SafeGoWithArgs(func(args ...interface{}) {
+			defer func() { <-workers }()
+			defer wg.Done()
+			// Track per-file processing time
+			fileStartTime := time.Now()
+
+			logger.Debug("Reading file %q", file)
+			fileData, err := os.ReadFile(file)
+			if err != nil {
+				logger.Error("Failed to read file %q: %v", file, err)
+				return
+			}
+			fileDataStr := string(fileData)
+
+			logger.Debug("Saving file %q to database", file)
+			err = db.SaveFile(file, fileData)
+			if err != nil {
+				logger.Error("Failed to save file %q to database: %v", file, err)
+				return
+			}
+
+			logger.Debug("Running isolate commands for file %q", file)
+			fileDataStr, err = RunIsolateCommands(association, file, fileDataStr, &fileMutex)
+			if err != nil {
+				logger.Error("Failed to run isolate commands for file %q: %v", file, err)
+				return
+			}
+
+			logger.Debug("Running other commands for file %q", file)
+			fileDataStr, err = RunOtherCommands(file, fileDataStr, association, &fileMutex, commandLoggers)
+			if err != nil {
+				logger.Error("Failed to run other commands for file %q: %v", file, err)
+				return
+			}
+
+			logger.Debug("Writing file %q", file)
+			err = os.WriteFile(file, []byte(fileDataStr), 0644)
+			if err != nil {
+				logger.Error("Failed to write file %q: %v", file, err)
+				return
+			}
+
+			logger.Debug("File %q processed in %v", file, time.Since(fileStartTime))
+		}, file, commands)
 	}
 	wg.Wait()

-	// Print summary of all modifications
-	printSummary(originalLuaExpr)
+	processingTime := time.Since(startTime)
+	logger.Info("Processing completed in %v", processingTime)
+	if stats.ProcessedFiles > 0 {
+		logger.Info("Average time per file: %v", processingTime/time.Duration(stats.ProcessedFiles))
+	}
+
+	// TODO: Also give each command its own logger, maybe prefix it with something... Maybe give commands a name?
+	// Do that with logger.WithField("loglevel", level.String())
+	// Since each command also has its own log level
+	// TODO: Maybe even figure out how to run individual commands...?
+	// TODO: What to do with git? Figure it out ....
+
+	// if *gitFlag {
+	// 	logger.Info("Git integration enabled, setting up git repository")
+	// 	err := setupGit()
+	// 	if err != nil {
+	// 		logger.Error("Failed to setup git: %v", err)
+	// 		fmt.Fprintf(os.Stderr, "Error setting up git: %v\n", err)
+	// 		return
+	// 	}
+	// }
+
+	// logger.Debug("Expanding file patterns")
+	// files, err := expandFilePatterns(filePatterns)
+	// if err != nil {
+	// 	logger.Error("Failed to expand file patterns: %v", err)
+	// 	fmt.Fprintf(os.Stderr, "Error expanding file patterns: %v\n", err)
+	// 	return
+	// }
+
+	// if *gitFlag {
+	// 	logger.Info("Cleaning up git files before processing")
+	// 	err := cleanupGitFiles(files)
+	// 	if err != nil {
+	// 		logger.Error("Failed to cleanup git files: %v", err)
+	// 		fmt.Fprintf(os.Stderr, "Error cleaning up git files: %v\n", err)
+	// 		return
+	// 	}
+	// }
+	// if *resetFlag {
+	// 	logger.Info("Files reset to their original state, nothing more to do")
+	// 	log.Printf("Files reset to their original state, nothing more to do")
+	// 	return
+	// }
+
+	// Print summary
+	if stats.TotalModifications == 0 {
+		logger.Warning("No modifications were made in any files")
+	} else {
+		logger.Info("Operation complete! Modified %d values in %d/%d files",
+			stats.TotalModifications, stats.ProcessedFiles, stats.ProcessedFiles+stats.FailedFiles)
+		sortedCommands := []string{}
+		stats.ModificationsPerCommand.Range(func(key, value interface{}) bool {
+			sortedCommands = append(sortedCommands, key.(string))
+			return true
+		})
+		sort.Strings(sortedCommands)
+
+		for _, command := range sortedCommands {
+			count, _ := stats.ModificationsPerCommand.Load(command)
+			if count.(int) > 0 {
+				logger.Info("\tCommand %q made %d modifications", command, count)
+			} else {
+				logger.Warning("\tCommand %q made no modifications", command)
+			}
+		}
+	}
 }

-// printSummary outputs a formatted summary of all modifications made
-func printSummary(operation string) {
-	if stats.TotalModifications == 0 {
-		Warning.Printf("No modifications were made in any files")
+func HandleSpecialArgs(args []string, err error, db utils.DB) (bool, error) {
+	switch args[0] {
+	case "reset":
+		err = utils.ResetAllFiles(db)
+		if err != nil {
+			logger.Error("Failed to reset all files: %v", err)
+			return true, err
+		}
+		logger.Info("All files reset")
+		return true, nil
+	case "dump":
+		err = db.RemoveAllFiles()
+		if err != nil {
+			logger.Error("Failed to remove all files from database: %v", err)
+			return true, err
+		}
+		logger.Info("All files removed from database")
+		return true, nil
+	}
+	return false, nil
+}
+
+func CreateExampleConfig() {
+	commands := []utils.ModifyCommand{
+		{
+			Name:     "DoubleNumericValues",
+			Regex:    "<value>(\\d+)</value>",
+			Lua:      "v1 * 2",
+			Files:    []string{"data/*.xml"},
+			LogLevel: "INFO",
+		},
+		{
+			Name:     "UpdatePrices",
+			Regex:    "price=\"(\\d+)\"",
+			Lua:      "if num(v1) < 100 then return v1 * 1.5 else return v1 end",
+			Files:    []string{"items/*.xml", "shop/*.xml"},
+			LogLevel: "DEBUG",
+		},
+		{
+			Name:     "IsolatedTagUpdate",
+			Regex:    "<tag>(.*?)</tag>",
+			Lua:      "string.upper(s1)",
+			Files:    []string{"config.xml"},
+			Isolate:  true,
+			NoDedup:  true,
+			LogLevel: "TRACE",
+		},
+	}
+
+	data, err := yaml.Marshal(commands)
+	if err != nil {
+		logger.Error("Failed to marshal example config: %v", err)
 		return
 	}

-	Success.Printf("Operation complete! Modified %d values in %d/%d files using '%s'",
-		stats.TotalModifications, stats.ProcessedFiles, stats.ProcessedFiles+stats.FailedFiles, operation)
-
-	// Group modifications by file for better readability
-	fileGroups := make(map[string][]ModificationRecord)
-	for _, mod := range stats.Modifications {
-		fileGroups[mod.File] = append(fileGroups[mod.File], mod)
+	err = os.WriteFile("example_cook.yml", data, 0644)
+	if err != nil {
+		logger.Error("Failed to write example_cook.yml: %v", err)
+		return
 	}

-	// Print modifications by file
-	for file, mods := range fileGroups {
-		Success.Printf("📄 %s: %d modifications", file, len(mods))
-
-		// Show some sample modifications (max 5 per file to avoid overwhelming output)
-		maxSamples := 5
-		if len(mods) > maxSamples {
-			for i := 0; i < maxSamples; i++ {
-				mod := mods[i]
-				Success.Printf("   %d. '%s' → '%s' %s",
-					i+1, limitString(mod.OldValue, 20), limitString(mod.NewValue, 20), mod.Context)
-			}
-			Success.Printf("   ... and %d more modifications", len(mods)-maxSamples)
-		} else {
-			for i, mod := range mods {
-				Success.Printf("   %d. '%s' → '%s' %s",
-					i+1, limitString(mod.OldValue, 20), limitString(mod.NewValue, 20), mod.Context)
-			}
-		}
-	}
-
-	// Print a nice visual indicator of success
-	if stats.TotalModifications > 0 {
-		Success.Printf("🎉 All done! Modified %d values successfully!", stats.TotalModifications)
-	}
+	logger.Info("Wrote example_cook.yml")
 }

-// buildLuaScript creates a complete Lua script from the expression
-func buildLuaScript(luaExpr string) string {
-	// Track if we modified the expression
-	modified := false
-	original := luaExpr
+func RunOtherCommands(file string, fileDataStr string, association utils.FileCommandAssociation, fileMutex *sync.Mutex, commandLoggers map[string]*logger.Logger) (string, error) {
+	// Aggregate all the modifications and execute them
+	modifications := []utils.ReplaceCommand{}
+	for _, command := range association.Commands {
+		// Use command-specific logger if available, otherwise fall back to default logger
+		cmdLogger := logger.Default
+		if cmdLog, ok := commandLoggers[command.Name]; ok {
+			cmdLogger = cmdLog
+		}

-	// Auto-prepend v1 for expressions starting with operators
-	if strings.HasPrefix(luaExpr, "*") ||
-		strings.HasPrefix(luaExpr, "/") ||
-		strings.HasPrefix(luaExpr, "+") ||
-		strings.HasPrefix(luaExpr, "-") ||
-		strings.HasPrefix(luaExpr, "^") ||
-		strings.HasPrefix(luaExpr, "%") {
-		luaExpr = "v1 = v1" + luaExpr
-		modified = true
-	} else if strings.HasPrefix(luaExpr, "=") {
-		// Handle direct assignment with = operator
-		luaExpr = "v1 " + luaExpr
-		modified = true
+		cmdLogger.Info("Processing file %q with command %q", file, command.Regex)
+		newModifications, err := processor.ProcessRegex(fileDataStr, command, file)
+		if err != nil {
+			return fileDataStr, fmt.Errorf("failed to process file %q with command %q: %w", file, command.Regex, err)
+		}
+		modifications = append(modifications, newModifications...)
+		// It is not guranteed that all the commands will be executed...
+		// TODO: Make this better
+		// We'd have to pass the map to executemodifications or something...
+		count, ok := stats.ModificationsPerCommand.Load(command.Name)
+		if !ok {
+			count = 0
+		}
+		stats.ModificationsPerCommand.Store(command.Name, count.(int)+len(newModifications))
+
+		cmdLogger.Debug("Command %q generated %d modifications", command.Name, len(newModifications))
 	}

-	// Add assignment if needed
-	if !strings.Contains(luaExpr, "=") {
-		luaExpr = "v1 = " + luaExpr
-		modified = true
+	if len(modifications) == 0 {
+		logger.Info("No modifications found for file %q", file)
+		return fileDataStr, nil
 	}

-	// Replace shorthand v[] and s[] with their direct variable names
-	newExpr := strings.ReplaceAll(luaExpr, "v[1]", "v1")
-	newExpr = strings.ReplaceAll(newExpr, "v[2]", "v2")
-	newExpr = strings.ReplaceAll(newExpr, "s[1]", "s1")
-	newExpr = strings.ReplaceAll(newExpr, "s[2]", "s2")
+	// Sort commands in reverse order for safe replacements
+	var count int
+	fileDataStr, count = utils.ExecuteModifications(modifications, fileDataStr)

-	if newExpr != luaExpr {
-		luaExpr = newExpr
-		modified = true
-	}
+	fileMutex.Lock()
+	stats.ProcessedFiles++
+	stats.TotalModifications += count
+	fileMutex.Unlock()

-	if modified {
-		Info.Printf("Transformed Lua expression: '%s' → '%s'", original, luaExpr)
-	}
-
-	return luaExpr
+	logger.Info("Executed %d modifications for file %q", count, file)
+	return fileDataStr, nil
 }

-func processFile(filename string, pattern *regexp.Regexp, luaExpr string, originalExpr string) error {
-	fullPath := filepath.Join(".", filename)
-
-	// Read file content
-	content, err := os.ReadFile(fullPath)
-	if err != nil {
-		Error.Printf("Cannot read file %s: %v", fullPath, err)
-		return fmt.Errorf("error reading file: %v", err)
-	}
-
-	fileContent := string(content)
-	Info.Printf("File %s loaded: %d bytes", fullPath, len(content))
-
-	// Process the content
-	result, modificationCount, matchCount, err := process(fileContent, pattern, luaExpr, filename, originalExpr)
-	if err != nil {
-		Error.Printf("Processing failed for %s: %v", fullPath, err)
-		return err
-	}
-
-	// Update global stats
-	stats.TotalMatches += matchCount
-	stats.TotalModifications += modificationCount
-
-	if modificationCount == 0 {
-		Warning.Printf("No modifications made to %s - pattern didn't match any content", fullPath)
-		return nil
-	}
-
-	// Write the modified content back
-	err = os.WriteFile(fullPath, []byte(result), 0644)
-	if err != nil {
-		Error.Printf("Failed to save changes to %s: %v", fullPath, err)
-		return fmt.Errorf("error writing file: %v", err)
-	}
-
-	Info.Printf("Made %d modifications to %s and saved (%d bytes)",
-		modificationCount, fullPath, len(result))
-
-	return nil
-}
-
-func process(data string, pattern *regexp.Regexp, luaExpr string, filename string, originalExpr string) (string, int, int, error) {
-	L := lua.NewState()
-	defer L.Close()
-
-	// Initialize Lua environment
-	modificationCount := 0
-	matchCount := 0
-
-	// Load math library
-	L.Push(L.GetGlobal("require"))
-	L.Push(lua.LString("math"))
-	if err := L.PCall(1, 1, nil); err != nil {
-		Error.Printf("Failed to load Lua math library: %v", err)
-		return data, 0, 0, fmt.Errorf("error loading Lua math library: %v", err)
-	}
-
-	// Initialize helper functions
-	helperScript := `
-- Custom Lua helpers for math operations
-function min(a, b) return math.min(a, b) end
-function max(a, b) return math.max(a, b) end
-function round(x) return math.floor(x + 0.5) end
-function floor(x) return math.floor(x) end
-function ceil(x) return math.ceil(x) end
-
-- String to number conversion helper
-function num(str)
-    return tonumber(str) or 0
-end
-
-- Number to string conversion
-function str(num)
-    return tostring(num)
-end
-
-- Check if string is numeric
-function is_number(str)
-    return tonumber(str) ~= nil
-end
-`
-	if err := L.DoString(helperScript); err != nil {
-		Error.Printf("Failed to load Lua helper functions: %v", err)
-		return data, 0, 0, fmt.Errorf("error loading helper functions: %v", err)
-	}
-
-	// Process all regex matches
-	result := pattern.ReplaceAllStringFunc(data, func(match string) string {
-		matchCount++
-		captures := pattern.FindStringSubmatch(match)
-		if len(captures) <= 1 {
-			// No capture groups, return unchanged
-			Warning.Printf("Match found but no capture groups: %s", limitString(match, 50))
-			return match
-		}
-		Info.Printf("Match found: %s", limitString(match, 50))
-
-		// Set up global variables v1, v2, etc. for the Lua context
-		captureValues := make([]string, len(captures)-1)
-		for i, capture := range captures[1:] {
-			captureValues[i] = capture
-			// Set the raw string value with s prefix
-			L.SetGlobal(fmt.Sprintf("s%d", i+1), lua.LString(capture))
-
-			// Also set numeric version with v prefix if possible
-			floatVal, err := strconv.ParseFloat(capture, 64)
-			if err == nil {
-				L.SetGlobal(fmt.Sprintf("v%d", i+1), lua.LNumber(floatVal))
-			} else {
-				// For non-numeric values, set v also to the string value
-				L.SetGlobal(fmt.Sprintf("v%d", i+1), lua.LString(capture))
-			}
+func RunIsolateCommands(association utils.FileCommandAssociation, file string, fileDataStr string, fileMutex *sync.Mutex) (string, error) {
+	for _, isolateCommand := range association.IsolateCommands {
+		logger.Info("Processing file %q with isolate command %q", file, isolateCommand.Regex)
+		modifications, err := processor.ProcessRegex(fileDataStr, isolateCommand, file)
+		if err != nil {
+			return fileDataStr, fmt.Errorf("failed to process file %q with isolate command %q: %w", file, isolateCommand.Regex, err)
 		}

-		// Execute the user's Lua code
-		if err := L.DoString(luaExpr); err != nil {
-			Error.Printf("Lua execution failed for match '%s': %v", limitString(match, 50), err)
-			return match // Return unchanged on error
-		}
-
-		// Get the modified values after Lua execution
-		modifications := make(map[int]string)
-		for i := 0; i < len(captures)-1 && i < 12; i++ {
-			// Check both v and s variables to see if any were modified
-			vVarName := fmt.Sprintf("v%d", i+1)
-			sVarName := fmt.Sprintf("s%d", i+1)
-
-			// First check the v-prefixed numeric variable
-			vLuaVal := L.GetGlobal(vVarName)
-			sLuaVal := L.GetGlobal(sVarName)
-
-			oldVal := captures[i+1]
-			var newVal string
-			var useModification bool
-
-			// First priority: check if the string variable was modified
-			if sLuaVal != lua.LNil {
-				if sStr, ok := sLuaVal.(lua.LString); ok {
-					newStrVal := string(sStr)
-					if newStrVal != oldVal {
-						newVal = newStrVal
-						useModification = true
-					}
-				}
-			}
-
-			// Second priority: if string wasn't modified, check numeric variable
-			if !useModification && vLuaVal != lua.LNil {
-				switch v := vLuaVal.(type) {
-				case lua.LNumber:
-					newNumVal := strconv.FormatFloat(float64(v), 'f', -1, 64)
-					if newNumVal != oldVal {
-						newVal = newNumVal
-						useModification = true
-					}
-				case lua.LString:
-					newStrVal := string(v)
-					if newStrVal != oldVal {
-						newVal = newStrVal
-						useModification = true
-					}
-				default:
-					newDefaultVal := fmt.Sprintf("%v", v)
-					if newDefaultVal != oldVal {
-						newVal = newDefaultVal
-						useModification = true
-					}
-				}
-			}
-
-			// Record the modification if anything changed
-			if useModification {
-				modifications[i] = newVal
-			}
-		}
-
-		// Apply modifications to the matched text
 		if len(modifications) == 0 {
-			return match // No changes
+			logger.Warning("No modifications found for file %q", file)
+			return fileDataStr, nil
 		}

-		result := match
-		for i, newVal := range modifications {
-			oldVal := captures[i+1]
-			// Special handling for empty capture groups
-			if oldVal == "" {
-				// Find the position where the empty capture group should be
-				// by analyzing the regex pattern and current match
-				parts := pattern.SubexpNames()
-				if i+1 < len(parts) && parts[i+1] != "" {
-					// Named capture groups
-					subPattern := fmt.Sprintf("(?P<%s>)", parts[i+1])
-					emptyGroupPattern := regexp.MustCompile(subPattern)
-					if loc := emptyGroupPattern.FindStringIndex(result); loc != nil {
-						// Insert the new value at the capture group location
-						result = result[:loc[0]] + newVal + result[loc[1]:]
-					}
-				} else {
-					// For unnamed capture groups, we need to find where they would be in the regex
-					// This is a simplification that might not work for complex regex patterns
-					// but should handle the test case with <value></value>
-					tagPattern := regexp.MustCompile("<value></value>")
-					if loc := tagPattern.FindStringIndex(result); loc != nil {
-						// Replace the empty tag content with our new value
-						result = result[:loc[0]+7] + newVal + result[loc[1]-8:]
-					}
-				}
-			} else {
-				// Normal replacement for non-empty capture groups
-				result = strings.Replace(result, oldVal, newVal, 1)
-			}
+		var count int
+		fileDataStr, count = utils.ExecuteModifications(modifications, fileDataStr)

-			// Extract a bit of context from the match for better reporting
-			contextStart := max(0, strings.Index(match, oldVal)-10)
-			contextLength := min(30, len(match)-contextStart)
-			if contextStart+contextLength > len(match) {
-				contextLength = len(match) - contextStart
-			}
-			contextStr := "..." + match[contextStart:contextStart+contextLength] + "..."
+		fileMutex.Lock()
+		stats.ProcessedFiles++
+		stats.TotalModifications += count
+		fileMutex.Unlock()

-			// Log the modification
-			Info.Printf("Modified value [%d]: '%s' → '%s'", i+1, limitString(oldVal, 30), limitString(newVal, 30))
-
-			// Record the modification for summary
-			stats.Modifications = append(stats.Modifications, ModificationRecord{
-				File:      filename,
-				OldValue:  oldVal,
-				NewValue:  newVal,
-				Operation: originalExpr,
-				Context:   fmt.Sprintf("(in %s)", limitString(contextStr, 30)),
-			})
-		}
-
-		modificationCount++
-		return result
-	})
-
-	return result, modificationCount, matchCount, nil
-}
-
-// limitString truncates a string to maxLen and adds "..." if truncated
-func limitString(s string, maxLen int) string {
-	s = strings.ReplaceAll(s, "\n", "\\n")
-	if len(s) <= maxLen {
-		return s
+		logger.Info("Executed %d isolate modifications for file %q", count, file)
 	}
-	return s[:maxLen-3] + "..."
-}
-
-// max returns the maximum of two integers
-func max(a, b int) int {
-	if a > b {
-		return a
-	}
-	return b
-}
-
-// min returns the minimum of two integers
-func min(a, b int) int {
-	if a < b {
-		return a
-	}
-	return b
-}
-
-func expandFilePatterns(patterns []string) ([]string, error) {
-	var files []string
-	filesMap := make(map[string]bool)
-
-	for _, pattern := range patterns {
-		matches, _ := doublestar.Glob(os.DirFS("."), pattern)
-		for _, m := range matches {
-			if info, err := os.Stat(m); err == nil && !info.IsDir() && !filesMap[m] {
-				filesMap[m], files = true, append(files, m)
-			}
-		}
-	}
-
-	if len(files) > 0 {
-		Info.Printf("Found %d files to process", len(files))
-	}
-	return files, nil
+	return fileDataStr, nil
 }
--- a/main_test.go
+++ b/main_test.go
--- a/processor/processor.go
+++ b/processor/processor.go
@@ -0,0 +1,415 @@
+package processor
+
+import (
+	"fmt"
+	"io"
+	"net/http"
+	"strings"
+
+	logger "git.site.quack-lab.dev/dave/cylogger"
+	lua "github.com/yuin/gopher-lua"
+)
+
+// Maybe we make this an interface again for the shits and giggles
+// We will see, it could easily be...
+
+func NewLuaState() (*lua.LState, error) {
+	L := lua.NewState()
+	// defer L.Close()
+
+	// Load math library
+	logger.Debug("Loading Lua math library")
+	L.Push(L.GetGlobal("require"))
+	L.Push(lua.LString("math"))
+	if err := L.PCall(1, 1, nil); err != nil {
+		logger.Error("Failed to load Lua math library: %v", err)
+		return nil, fmt.Errorf("error loading Lua math library: %v", err)
+	}
+
+	// Initialize helper functions
+	logger.Debug("Initializing Lua helper functions")
+	if err := InitLuaHelpers(L); err != nil {
+		logger.Error("Failed to initialize Lua helper functions: %v", err)
+		return nil, err
+	}
+
+	return L, nil
+}
+
+// func Process(filename string, pattern string, luaExpr string) (int, int, error) {
+// 	logger.Debug("Processing file %q with pattern %q", filename, pattern)
+//
+// 	// Read file content
+// 	cwd, err := os.Getwd()
+// 	if err != nil {
+// 		logger.Error("Failed to get current working directory: %v", err)
+// 		return 0, 0, fmt.Errorf("error getting current working directory: %v", err)
+// 	}
+//
+// 	fullPath := filepath.Join(cwd, filename)
+// 	logger.Trace("Reading file from: %s", fullPath)
+//
+// 	stat, err := os.Stat(fullPath)
+// 	if err != nil {
+// 		logger.Error("Failed to stat file %s: %v", fullPath, err)
+// 		return 0, 0, fmt.Errorf("error getting file info: %v", err)
+// 	}
+// 	logger.Debug("File size: %d bytes, modified: %s", stat.Size(), stat.ModTime().Format(time.RFC3339))
+//
+// 	content, err := os.ReadFile(fullPath)
+// 	if err != nil {
+// 		logger.Error("Failed to read file %s: %v", fullPath, err)
+// 		return 0, 0, fmt.Errorf("error reading file: %v", err)
+// 	}
+//
+// 	fileContent := string(content)
+// 	logger.Trace("File read successfully: %d bytes, hash: %x", len(content), md5sum(content))
+//
+// 	// Detect and log file type
+// 	fileType := detectFileType(filename, fileContent)
+// 	if fileType != "" {
+// 		logger.Debug("Detected file type: %s", fileType)
+// 	}
+//
+// 	// Process the content
+// 	logger.Debug("Starting content processing")
+// 	modifiedContent, modCount, matchCount, err := ProcessContent(fileContent, pattern, luaExpr)
+// 	if err != nil {
+// 		logger.Error("Processing error: %v", err)
+// 		return 0, 0, err
+// 	}
+//
+// 	logger.Debug("Processing results: %d matches, %d modifications", matchCount, modCount)
+//
+// 	// If we made modifications, save the file
+// 	if modCount > 0 {
+// 		// Calculate changes summary
+// 		changePercent := float64(len(modifiedContent)) / float64(len(fileContent)) * 100
+// 		logger.Info("File size change: %d → %d bytes (%.1f%%)",
+// 			len(fileContent), len(modifiedContent), changePercent)
+//
+// 		logger.Debug("Writing modified content to %s", fullPath)
+// 		err = os.WriteFile(fullPath, []byte(modifiedContent), 0644)
+// 		if err != nil {
+// 			logger.Error("Failed to write to file %s: %v", fullPath, err)
+// 			return 0, 0, fmt.Errorf("error writing file: %v", err)
+// 		}
+// 		logger.Debug("File written successfully, new hash: %x", md5sum([]byte(modifiedContent)))
+// 	} else if matchCount > 0 {
+// 		logger.Debug("No content modifications needed for %d matches", matchCount)
+// 	} else {
+// 		logger.Debug("No matches found in file")
+// 	}
+//
+// 	return modCount, matchCount, nil
+// }
+
+// FromLua converts a Lua table to a struct or map recursively
+func FromLua(L *lua.LState, luaValue lua.LValue) (interface{}, error) {
+	switch v := luaValue.(type) {
+	// Well shit...
+	// Tables in lua are both maps and arrays
+	// As arrays they are ordered and as maps, obviously, not
+	// So when we parse them to a go map we fuck up the order for arrays
+	// We have to find a better way....
+	case *lua.LTable:
+		isArray, err := IsLuaTableArray(L, v)
+		if err != nil {
+			return nil, err
+		}
+		if isArray {
+			result := make([]interface{}, 0)
+			v.ForEach(func(key lua.LValue, value lua.LValue) {
+				converted, _ := FromLua(L, value)
+				result = append(result, converted)
+			})
+			return result, nil
+		} else {
+			result := make(map[string]interface{})
+			v.ForEach(func(key lua.LValue, value lua.LValue) {
+				converted, _ := FromLua(L, value)
+				result[key.String()] = converted
+			})
+			return result, nil
+		}
+	case lua.LString:
+		return string(v), nil
+	case lua.LBool:
+		return bool(v), nil
+	case lua.LNumber:
+		return float64(v), nil
+	default:
+		return nil, nil
+	}
+}
+
+func IsLuaTableArray(L *lua.LState, v *lua.LTable) (bool, error) {
+	logger.Trace("Checking if Lua table is an array")
+	L.SetGlobal("table_to_check", v)
+
+	// Use our predefined helper function from InitLuaHelpers
+	err := L.DoString(`is_array = isArray(table_to_check)`)
+	if err != nil {
+		logger.Error("Error determining if table is an array: %v", err)
+		return false, fmt.Errorf("error determining if table is array: %w", err)
+	}
+
+	// Check the result of our Lua function
+	isArray := L.GetGlobal("is_array")
+	// LVIsFalse returns true if a given LValue is a nil or false otherwise false.
+	result := !lua.LVIsFalse(isArray)
+	logger.Trace("Lua table is array: %v", result)
+	return result, nil
+}
+
+// InitLuaHelpers initializes common Lua helper functions
+func InitLuaHelpers(L *lua.LState) error {
+	logger.Debug("Loading Lua helper functions")
+
+	helperScript := `
+-- Custom Lua helpers for math operations
+function min(a, b) return math.min(a, b) end
+function max(a, b) return math.max(a, b) end
+function round(x, n)
+	if n == nil then n = 0 end
+	return math.floor(x * 10^n + 0.5) / 10^n
+end
+function floor(x) return math.floor(x) end
+function ceil(x) return math.ceil(x) end
+function upper(s) return string.upper(s) end
+function lower(s) return string.lower(s) end
+function format(s, ...) return string.format(s, ...) end
+
+-- String split helper
+function strsplit(inputstr, sep)
+  if sep == nil then
+    sep = "%s"
+  end
+  local t = {}
+  for str in string.gmatch(inputstr, "([^"..sep.."]+)") do
+    table.insert(t, str)
+  end
+  return t
+end
+
+---@param table table
+---@param depth number?
+function DumpTable(table, depth)
+	if depth == nil then
+		depth = 0
+	end
+	if (depth > 200) then
+		print("Error: Depth > 200 in dumpTable()")
+		return
+	end
+	for k, v in pairs(table) do
+		if (type(v) == "table") then
+			print(string.rep("  ", depth) .. k .. ":")
+			DumpTable(v, depth + 1)
+		else
+			print(string.rep("  ", depth) .. k .. ": ", v)
+		end
+	end
+end
+
+-- String to number conversion helper
+function num(str)
+    return tonumber(str) or 0
+end
+
+-- Number to string conversion
+function str(num)
+    return tostring(num)
+end
+
+-- Check if string is numeric
+function is_number(str)
+    return tonumber(str) ~= nil
+end
+
+function isArray(t)
+    if type(t) ~= "table" then return false end
+    local max = 0
+    local count = 0
+    for k, _ in pairs(t) do
+        if type(k) ~= "number" or k < 1 or math.floor(k) ~= k then
+            return false
+        end
+        max = math.max(max, k)
+        count = count + 1
+    end
+    return max == count
+end
+
+modified = false
+`
+	if err := L.DoString(helperScript); err != nil {
+		logger.Error("Failed to load Lua helper functions: %v", err)
+		return fmt.Errorf("error loading helper functions: %v", err)
+	}
+
+	logger.Debug("Setting up Lua print function to Go")
+	L.SetGlobal("print", L.NewFunction(printToGo))
+	L.SetGlobal("fetch", L.NewFunction(fetch))
+	return nil
+}
+
+// LimitString truncates a string to maxLen and adds "..." if truncated
+func LimitString(s string, maxLen int) string {
+	s = strings.ReplaceAll(s, "\n", "\\n")
+	if len(s) <= maxLen {
+		return s
+	}
+	return s[:maxLen-3] + "..."
+}
+
+func PrependLuaAssignment(luaExpr string) string {
+	// Auto-prepend v1 for expressions starting with operators
+	if strings.HasPrefix(luaExpr, "*") ||
+		strings.HasPrefix(luaExpr, "/") ||
+		strings.HasPrefix(luaExpr, "+") ||
+		strings.HasPrefix(luaExpr, "-") ||
+		strings.HasPrefix(luaExpr, "^") ||
+		strings.HasPrefix(luaExpr, "%") {
+		luaExpr = "v1 = v1" + luaExpr
+	} else if strings.HasPrefix(luaExpr, "=") {
+		// Handle direct assignment with = operator
+		luaExpr = "v1 " + luaExpr
+	}
+
+	// Add assignment if needed
+	if !strings.Contains(luaExpr, "=") {
+		luaExpr = "v1 = " + luaExpr
+	}
+	return luaExpr
+}
+
+// BuildLuaScript prepares a Lua expression from shorthand notation
+func BuildLuaScript(luaExpr string) string {
+	logger.Debug("Building Lua script from expression: %s", luaExpr)
+
+	luaExpr = PrependLuaAssignment(luaExpr)
+
+	// This allows the user to specify whether or not they modified a value
+	// If they do nothing we assume they did modify (no return at all)
+	// If they return before our return then they themselves specify what they did
+	// If nothing is returned lua assumes nil
+	// So we can say our value was modified if the return value is either nil or true
+	// If the return value is false then the user wants to keep the original
+	fullScript := fmt.Sprintf(`
+		function run()
+			%s
+		end
+		local res = run()
+		modified = res == nil or res
+	`, luaExpr)
+
+	return fullScript
+}
+
+func printToGo(L *lua.LState) int {
+	top := L.GetTop()
+
+	args := make([]interface{}, top)
+	for i := 1; i <= top; i++ {
+		args[i-1] = L.Get(i)
+	}
+
+	// Format the message with proper spacing between arguments
+	var parts []string
+	for _, arg := range args {
+		parts = append(parts, fmt.Sprintf("%v", arg))
+	}
+	message := strings.Join(parts, " ")
+
+	// Use the LUA log level with a script tag
+	logger.Lua("%s", message)
+	return 0
+}
+
+func fetch(L *lua.LState) int {
+	// Get URL from first argument
+	url := L.ToString(1)
+	if url == "" {
+		L.Push(lua.LNil)
+		L.Push(lua.LString("URL is required"))
+		return 2
+	}
+
+	// Get options from second argument if provided
+	var method string = "GET"
+	var headers map[string]string = make(map[string]string)
+	var body string = ""
+
+	if L.GetTop() > 1 {
+		options := L.ToTable(2)
+		if options != nil {
+			// Get method
+			if methodVal := options.RawGetString("method"); methodVal != lua.LNil {
+				method = methodVal.String()
+			}
+
+			// Get headers
+			if headersVal := options.RawGetString("headers"); headersVal != lua.LNil {
+				if headersTable, ok := headersVal.(*lua.LTable); ok {
+					headersTable.ForEach(func(key lua.LValue, value lua.LValue) {
+						headers[key.String()] = value.String()
+					})
+				}
+			}
+
+			// Get body
+			if bodyVal := options.RawGetString("body"); bodyVal != lua.LNil {
+				body = bodyVal.String()
+			}
+		}
+	}
+
+	// Create HTTP request
+	req, err := http.NewRequest(method, url, strings.NewReader(body))
+	if err != nil {
+		L.Push(lua.LNil)
+		L.Push(lua.LString(fmt.Sprintf("Error creating request: %v", err)))
+		return 2
+	}
+
+	// Set headers
+	for key, value := range headers {
+		req.Header.Set(key, value)
+	}
+
+	// Make request
+	client := &http.Client{}
+	resp, err := client.Do(req)
+	if err != nil {
+		L.Push(lua.LNil)
+		L.Push(lua.LString(fmt.Sprintf("Error making request: %v", err)))
+		return 2
+	}
+	defer resp.Body.Close()
+
+	// Read response body
+	bodyBytes, err := io.ReadAll(resp.Body)
+	if err != nil {
+		L.Push(lua.LNil)
+		L.Push(lua.LString(fmt.Sprintf("Error reading response: %v", err)))
+		return 2
+	}
+
+	// Create response table
+	responseTable := L.NewTable()
+	responseTable.RawSetString("status", lua.LNumber(resp.StatusCode))
+	responseTable.RawSetString("statusText", lua.LString(resp.Status))
+	responseTable.RawSetString("ok", lua.LBool(resp.StatusCode >= 200 && resp.StatusCode < 300))
+	responseTable.RawSetString("body", lua.LString(string(bodyBytes)))
+
+	// Set headers in response
+	headersTable := L.NewTable()
+	for key, values := range resp.Header {
+		headersTable.RawSetString(key, lua.LString(values[0]))
+	}
+	responseTable.RawSetString("headers", headersTable)
+
+	L.Push(responseTable)
+	return 1
+}
--- a/processor/regex.go
+++ b/processor/regex.go
@@ -0,0 +1,391 @@
+package processor
+
+import (
+	"cook/utils"
+	"fmt"
+	"regexp"
+	"strconv"
+	"strings"
+	"time"
+
+	logger "git.site.quack-lab.dev/dave/cylogger"
+	lua "github.com/yuin/gopher-lua"
+)
+
+type CaptureGroup struct {
+	Name    string
+	Value   string
+	Updated string
+	Range   [2]int
+}
+
+// ProcessContent applies regex replacement with Lua processing
+// The filename here exists ONLY so we can pass it to the lua environment
+// It's not used for anything else
+func ProcessRegex(content string, command utils.ModifyCommand, filename string) ([]utils.ReplaceCommand, error) {
+	var commands []utils.ReplaceCommand
+	logger.Trace("Processing regex: %q", command.Regex)
+
+	// Start timing the regex processing
+	startTime := time.Now()
+
+	// We don't HAVE to do this multiple times for a pattern
+	// But it's quick enough for us to not care
+	pattern := resolveRegexPlaceholders(command.Regex)
+	// I'm not too happy about having to trim regex, we could have meaningful whitespace or newlines
+	// But it's a compromise that allows us to use | in yaml
+	// Otherwise we would have to escape every god damn pair of quotation marks
+	// And a bunch of other shit
+	pattern = strings.TrimSpace(pattern)
+	logger.Debug("Compiling regex pattern: %s", pattern)
+
+	patternCompileStart := time.Now()
+	compiledPattern, err := regexp.Compile(pattern)
+	if err != nil {
+		logger.Error("Error compiling pattern: %v", err)
+		return commands, fmt.Errorf("error compiling pattern: %v", err)
+	}
+	logger.Debug("Compiled pattern successfully in %v: %s", time.Since(patternCompileStart), pattern)
+
+	// Same here, it's just string concatenation, it won't kill us
+	// More important is that we don't fuck up the command
+	// But we shouldn't be able to since it's passed by value
+	previous := command.Lua
+	luaExpr := BuildLuaScript(command.Lua)
+	logger.Debug("Transformed Lua expression: %q → %q", previous, luaExpr)
+
+	// Process all regex matches
+	matchFindStart := time.Now()
+	indices := compiledPattern.FindAllStringSubmatchIndex(content, -1)
+	matchFindDuration := time.Since(matchFindStart)
+
+	logger.Debug("Found %d matches in content of length %d (search took %v)",
+		len(indices), len(content), matchFindDuration)
+
+	// Log pattern complexity metrics
+	patternComplexity := estimatePatternComplexity(pattern)
+	logger.Debug("Pattern complexity estimate: %d", patternComplexity)
+
+	if len(indices) == 0 {
+		logger.Warning("No matches found for regex: %q", pattern)
+		logger.Debug("Total regex processing time: %v", time.Since(startTime))
+		return commands, nil
+	}
+
+	// We walk backwards because we're replacing something with something else that might be longer
+	// And in the case it is longer than the original all indicces past that change will be fucked up
+	// By going backwards we fuck up all the indices to the end of the file that we don't care about
+	// Because there either aren't any (last match) or they're already modified (subsequent matches)
+	for i, matchIndices := range indices {
+		logger.Debug("Processing match %d of %d", i+1, len(indices))
+		logger.Trace("Match indices: %v (match position %d-%d)", matchIndices, matchIndices[0], matchIndices[1])
+
+		L, err := NewLuaState()
+		if err != nil {
+			logger.Error("Error creating Lua state: %v", err)
+			return commands, fmt.Errorf("error creating Lua state: %v", err)
+		}
+		L.SetGlobal("file", lua.LString(filename))
+		// Hmm... Maybe we don't want to defer this..
+		// Maybe we want to close them every iteration
+		// We'll leave it as is for now
+		defer L.Close()
+		logger.Trace("Lua state created successfully for match %d", i+1)
+
+		// Why we're doing this whole song and dance of indices is to properly handle empty matches
+		// Plus it's a little cleaner to surgically replace our matches
+		// If we were to use string.replace and encountered an empty match there'd be nothing to replace
+		// But using indices an empty match would have its starting and ending indices be the same
+		// So when we're cutting open the array we say 0:7 + modified + 7:end
+		// As if concatenating in the middle of the array
+		// Plus it supports lookarounds
+		match := content[matchIndices[0]:matchIndices[1]]
+		matchPreview := match
+		if len(match) > 50 {
+			matchPreview = match[:47] + "..."
+		}
+		logger.Trace("Matched content: %q (length: %d)", matchPreview, len(match))
+
+		groups := matchIndices[2:]
+		if len(groups) <= 0 {
+			logger.Warning("No capture groups found for match %q and regex %q", matchPreview, pattern)
+			continue
+		}
+		if len(groups)%2 == 1 {
+			logger.Warning("Invalid number of group indices (%d), should be even: %v", len(groups), groups)
+			continue
+		}
+
+		// Count how many valid groups we have
+		validGroups := 0
+		for j := 0; j < len(groups); j += 2 {
+			if groups[j] != -1 && groups[j+1] != -1 {
+				validGroups++
+			}
+		}
+		logger.Debug("Found %d valid capture groups in match", validGroups)
+
+		for _, index := range groups {
+			if index == -1 {
+				logger.Warning("Negative index encountered in match indices %v. This may indicate an issue with the regex pattern or an empty/optional capture group.", matchIndices)
+				continue
+			}
+		}
+
+		// We have to use array to preserve order
+		// Very important for the reconstruction step
+		// Because we must overwrite the values in reverse order
+		// See comments a few dozen lines above for more details
+		captureGroups := make([]*CaptureGroup, 0, len(groups)/2)
+		groupNames := compiledPattern.SubexpNames()[1:]
+		for i, name := range groupNames {
+			start := groups[i*2]
+			end := groups[i*2+1]
+			if start == -1 || end == -1 {
+				continue
+			}
+
+			value := content[start:end]
+			captureGroups = append(captureGroups, &CaptureGroup{
+				Name:  name,
+				Value: value,
+				Range: [2]int{start, end},
+			})
+
+			// Include name info in log if available
+			if name != "" {
+				logger.Trace("Capture group '%s': %q (pos %d-%d)", name, value, start, end)
+			} else {
+				logger.Trace("Capture group #%d: %q (pos %d-%d)", i+1, value, start, end)
+			}
+		}
+
+		// Use the DeduplicateGroups flag to control whether to deduplicate capture groups
+		if !command.NoDedup {
+			logger.Debug("Deduplicating capture groups as specified in command settings")
+			captureGroups = deduplicateGroups(captureGroups)
+		}
+
+		if err := toLua(L, captureGroups); err != nil {
+			logger.Error("Failed to set Lua variables: %v", err)
+			continue
+		}
+		logger.Trace("Set %d capture groups as Lua variables", len(captureGroups))
+
+		if err := L.DoString(luaExpr); err != nil {
+			logger.Error("Lua script execution failed: %v\nScript: %s\nCapture Groups: %+v",
+				err, luaExpr, captureGroups)
+			continue
+		}
+		logger.Trace("Lua script executed successfully")
+
+		// Get modifications from Lua
+		captureGroups, err = fromLua(L, captureGroups)
+		if err != nil {
+			logger.Error("Failed to retrieve modifications from Lua: %v", err)
+			continue
+		}
+		logger.Trace("Retrieved updated values from Lua")
+
+		replacement := ""
+		replacementVar := L.GetGlobal("replacement")
+		if replacementVar.Type() != lua.LTNil {
+			replacement = replacementVar.String()
+			logger.Debug("Using global replacement: %q", replacement)
+		}
+
+		// Check if modification flag is set
+		modifiedVal := L.GetGlobal("modified")
+		if modifiedVal.Type() != lua.LTBool || !lua.LVAsBool(modifiedVal) {
+			logger.Debug("Skipping match - no modifications made by Lua script")
+			continue
+		}
+
+		if replacement == "" {
+			// Apply the modifications to the original match
+			replacement = match
+
+			// Count groups that were actually modified
+			modifiedGroups := 0
+			for _, capture := range captureGroups {
+				if capture.Value != capture.Updated {
+					modifiedGroups++
+				}
+			}
+			logger.Info("%d of %d capture groups identified for modification", modifiedGroups, len(captureGroups))
+
+			for _, capture := range captureGroups {
+				if capture.Value == capture.Updated {
+					logger.Info("Capture group unchanged: %s", LimitString(capture.Value, 50))
+					continue
+				}
+
+				// Log what changed with context
+				logger.Debug("Capture group %s scheduled for modification: %q → %q",
+					capture.Name, capture.Value, capture.Updated)
+
+				// Indices of the group are relative to content
+				// To relate them to match we have to subtract the match start index
+				// replacement = replacement[:groupStart] + newVal + replacement[groupEnd:]
+				commands = append(commands, utils.ReplaceCommand{
+					From: capture.Range[0],
+					To:   capture.Range[1],
+					With: capture.Updated,
+				})
+			}
+		} else {
+			commands = append(commands, utils.ReplaceCommand{
+				From: matchIndices[0],
+				To:   matchIndices[1],
+				With: replacement,
+			})
+		}
+	}
+
+	logger.Debug("Total regex processing time: %v", time.Since(startTime))
+	return commands, nil
+}
+
+func deduplicateGroups(captureGroups []*CaptureGroup) []*CaptureGroup {
+	deduplicatedGroups := make([]*CaptureGroup, 0)
+	for _, group := range captureGroups {
+		overlaps := false
+		logger.Debug("Checking capture group: %s with range %v", group.Name, group.Range)
+		for _, existingGroup := range deduplicatedGroups {
+			logger.Debug("Comparing with existing group: %s with range %v", existingGroup.Name, existingGroup.Range)
+			if group.Range[0] < existingGroup.Range[1] && group.Range[1] > existingGroup.Range[0] {
+				overlaps = true
+				logger.Warning("Detected overlap between capture group '%s' and existing group '%s' in range %v-%v and %v-%v", group.Name, existingGroup.Name, group.Range[0], group.Range[1], existingGroup.Range[0], existingGroup.Range[1])
+				break
+			}
+		}
+		if overlaps {
+			// We CAN just continue despite this fuckup
+			logger.Warning("Overlapping capture group: %s", group.Name)
+			continue
+		}
+		logger.Debug("No overlap detected for capture group: %s. Adding to deduplicated groups.", group.Name)
+		deduplicatedGroups = append(deduplicatedGroups, group)
+	}
+	return deduplicatedGroups
+}
+
+// The order of these replaces is important
+// This one handles !num-s inside of named capture groups
+// If it were not here our !num in a named capture group would
+// Expand to another capture group in the capture group
+// We really only want one (our named) capture group
+func resolveRegexPlaceholders(pattern string) string {
+	// Handle special pattern modifications
+	if !strings.HasPrefix(pattern, "(?s)") {
+		pattern = "(?s)" + pattern
+	}
+
+	namedGroupNum := regexp.MustCompile(`(?:(\?<[^>]+>)(!num))`)
+	pattern = namedGroupNum.ReplaceAllStringFunc(pattern, func(match string) string {
+		parts := namedGroupNum.FindStringSubmatch(match)
+		if len(parts) != 3 {
+			return match
+		}
+		replacement := `-?\d*\.?\d+`
+		return parts[1] + replacement
+	})
+	pattern = strings.ReplaceAll(pattern, "!num", `(-?\d*\.?\d+)`)
+	pattern = strings.ReplaceAll(pattern, "!any", `.*?`)
+	repPattern := regexp.MustCompile(`!rep\(([^,]+),\s*(\d+)\)`)
+	// !rep(pattern, count) repeats the pattern n times
+	// Inserting !any between each repetition
+	pattern = repPattern.ReplaceAllStringFunc(pattern, func(match string) string {
+		parts := repPattern.FindStringSubmatch(match)
+		if len(parts) != 3 {
+			return match
+		}
+		repeatedPattern := parts[1]
+		count := parts[2]
+		repetitions, _ := strconv.Atoi(count)
+		return strings.Repeat(repeatedPattern+".*?", repetitions-1) + repeatedPattern
+	})
+	return pattern
+}
+
+// ToLua sets capture groups as Lua variables (v1, v2, etc. for numeric values and s1, s2, etc. for strings)
+func toLua(L *lua.LState, data interface{}) error {
+	captureGroups, ok := data.([]*CaptureGroup)
+	if !ok {
+		return fmt.Errorf("expected []*CaptureGroup for captures, got %T", data)
+	}
+
+	groupindex := 0
+	for _, capture := range captureGroups {
+		if capture.Name == "" {
+			// We don't want to change the name of the capture group
+			// Even if it's empty
+			tempName := fmt.Sprintf("%d", groupindex+1)
+			groupindex++
+
+			L.SetGlobal("s"+tempName, lua.LString(capture.Value))
+
+			val, err := strconv.ParseFloat(capture.Value, 64)
+			if err == nil {
+				L.SetGlobal("v"+tempName, lua.LNumber(val))
+			}
+		} else {
+			val, err := strconv.ParseFloat(capture.Value, 64)
+			if err == nil {
+				L.SetGlobal(capture.Name, lua.LNumber(val))
+			} else {
+				L.SetGlobal(capture.Name, lua.LString(capture.Value))
+			}
+		}
+	}
+
+	return nil
+}
+
+// FromLua implements the Processor interface for RegexProcessor
+func fromLua(L *lua.LState, captureGroups []*CaptureGroup) ([]*CaptureGroup, error) {
+	captureIndex := 0
+	for _, capture := range captureGroups {
+		if capture.Name == "" {
+			capture.Name = fmt.Sprintf("%d", captureIndex+1)
+
+			vVarName := fmt.Sprintf("v%s", capture.Name)
+			sVarName := fmt.Sprintf("s%s", capture.Name)
+			captureIndex++
+
+			vLuaVal := L.GetGlobal(vVarName)
+			sLuaVal := L.GetGlobal(sVarName)
+
+			if sLuaVal.Type() == lua.LTString {
+				capture.Updated = sLuaVal.String()
+			}
+			// Numbers have priority
+			if vLuaVal.Type() == lua.LTNumber {
+				capture.Updated = vLuaVal.String()
+			}
+		} else {
+			// Easy shit
+			capture.Updated = L.GetGlobal(capture.Name).String()
+		}
+	}
+
+	return captureGroups, nil
+}
+
+// estimatePatternComplexity gives a rough estimate of regex pattern complexity
+// This can help identify potentially problematic patterns
+func estimatePatternComplexity(pattern string) int {
+	complexity := len(pattern)
+
+	// Add complexity for potentially expensive operations
+	complexity += strings.Count(pattern, ".*") * 10 // Greedy wildcard
+	complexity += strings.Count(pattern, ".*?") * 5 // Non-greedy wildcard
+	complexity += strings.Count(pattern, "[^") * 3  // Negated character class
+	complexity += strings.Count(pattern, "\\b") * 2 // Word boundary
+	complexity += strings.Count(pattern, "(") * 2   // Capture groups
+	complexity += strings.Count(pattern, "(?:") * 1 // Non-capture groups
+	complexity += strings.Count(pattern, "\\1") * 3 // Backreferences
+	complexity += strings.Count(pattern, "{") * 2   // Counted repetition
+
+	return complexity
+}
--- a/processor/regex_test.go
+++ b/processor/regex_test.go
--- a/processor/test_helper.go
+++ b/processor/test_helper.go
@@ -0,0 +1,27 @@
+package processor
+
+import (
+	"io"
+	"os"
+
+	logger "git.site.quack-lab.dev/dave/cylogger"
+)
+
+func init() {
+	// Only modify logger in test mode
+	// This checks if we're running under 'go test'
+	if os.Getenv("GO_TESTING") == "1" || os.Getenv("TESTING") == "1" {
+		// Initialize logger with ERROR level for tests
+		// to minimize noise in test output
+		logger.Init(logger.LevelError)
+
+		// Optionally redirect logger output to discard
+		// This prevents logger output from interfering with test output
+		disableTestLogs := os.Getenv("ENABLE_TEST_LOGS") != "1"
+		if disableTestLogs {
+			// Create a new logger that writes to nowhere
+			silentLogger := logger.New(io.Discard, "", 0)
+			logger.Default = silentLogger
+		}
+	}
+}
--- a/regression/regression_test.go
+++ b/regression/regression_test.go
@@ -0,0 +1,137 @@
+package regression
+
+import (
+	"cook/processor"
+	"cook/utils"
+	"os"
+	"path/filepath"
+	"testing"
+)
+
+func ApiAdaptor(content string, regex string, lua string) (string, int, int, error) {
+	command := utils.ModifyCommand{
+		Regex:    regex,
+		Lua:      lua,
+		LogLevel: "TRACE",
+	}
+
+	commands, err := processor.ProcessRegex(content, command, "test")
+	if err != nil {
+		return "", 0, 0, err
+	}
+
+	result, modifications := utils.ExecuteModifications(commands, content)
+	return result, modifications, len(commands), nil
+}
+
+func TestTalentsMechanicOutOfRange(t *testing.T) {
+	given := `<Talent identifier="quickfixer">
+    <Icon texture="Content/UI/TalentsIcons2.png" sheetindex="5,2" sheetelementsize="128,128"/>
+    <Description tag="talentdescription.quickfixer">
+      <Replace tag="[amount]" value="20" color="gui.green"/>
+      <Replace tag="[duration]" value="10" color="gui.green"/>
+    </Description>
+    <Description tag="talentdescription.repairmechanicaldevicestwiceasfast"/>
+    <AbilityGroupEffect abilityeffecttype="None">
+      <Abilities>
+        <CharacterAbilityGiveStat stattype="MechanicalRepairSpeed" value="1"/>
+      </Abilities>
+    </AbilityGroupEffect>
+    <AbilityGroupEffect abilityeffecttype="OnRepairComplete">
+      <Conditions>
+        <AbilityConditionItem tags="fabricator,door,engine,oxygengenerator,pump,turretammosource,deconstructor,medicalfabricator,ductblock"/>
+      </Conditions>
+      <Abilities>
+        <CharacterAbilityApplyStatusEffects>
+          <StatusEffects>
+            <StatusEffect type="OnAbility" target="Character" disabledeltatime="true">
+              <Affliction identifier="quickfixer" amount="10.0"/>
+            </StatusEffect>
+          </StatusEffects>
+        </CharacterAbilityApplyStatusEffects>
+      </Abilities>
+    </AbilityGroupEffect>
+  </Talent>`
+
+	actual := `<Talent identifier="quickfixer">
+    <Icon texture="Content/UI/TalentsIcons2.png" sheetindex="5,2" sheetelementsize="128,128"/>
+    <Description tag="talentdescription.quickfixer">
+      <Replace tag="[amount]" value="30" color="gui.green"/>
+      <Replace tag="[duration]" value="20" color="gui.green"/>
+    </Description>
+    <Description tag="talentdescription.repairmechanicaldevicestwiceasfast"/>
+    <AbilityGroupEffect abilityeffecttype="None">
+      <Abilities>
+        <CharacterAbilityGiveStat stattype="MechanicalRepairSpeed" value="2"/>
+      </Abilities>
+    </AbilityGroupEffect>
+    <AbilityGroupEffect abilityeffecttype="OnRepairComplete">
+      <Conditions>
+        <AbilityConditionItem tags="fabricator,door,engine,oxygengenerator,pump,turretammosource,deconstructor,medicalfabricator,ductblock"/>
+      </Conditions>
+      <Abilities>
+        <CharacterAbilityApplyStatusEffects>
+          <StatusEffects>
+            <StatusEffect type="OnAbility" target="Character" disabledeltatime="true">
+              <Affliction identifier="quickfixer" amount="20"/>
+            </StatusEffect>
+          </StatusEffects>
+        </CharacterAbilityApplyStatusEffects>
+      </Abilities>
+    </AbilityGroupEffect>
+  </Talent>`
+
+	result, mods, matches, err := ApiAdaptor(given, `<Talent identifier="quickfixer">!anyvalue="(?<movementspeed>!num)"!anyvalue="(?<duration>!num)"!anyvalue="(?<repairspeed>!num)"!anyamount="(?<durationv>!num)"`, "movementspeed=round(movementspeed*1.5, 2) duration=round(duration*2, 2) repairspeed=round(repairspeed*2, 2) durationv=duration")
+
+	if err != nil {
+		t.Fatalf("Error processing content: %v", err)
+	}
+
+	if matches != 4 {
+		t.Errorf("Expected 4 matches, got %d", matches)
+	}
+
+	if mods != 4 {
+		t.Errorf("Expected 4 modifications, got %d", mods)
+	}
+
+	if result != actual {
+		t.Errorf("expected %s, got %s", actual, result)
+	}
+}
+
+func TestIndexExplosions_ShouldNotPanic(t *testing.T) {
+	cwd, err := os.Getwd()
+	if err != nil {
+		t.Fatalf("Error getting current working directory: %v", err)
+	}
+
+	given, err := os.ReadFile(filepath.Join(cwd, "..", "testfiles", "OutpostItems.xml"))
+	if err != nil {
+		t.Fatalf("Error reading file: %v", err)
+	}
+
+	expected, err := os.ReadFile(filepath.Join(cwd, "..", "testfiles", "OutpostItemsExpected.xml"))
+	if err != nil {
+		t.Fatalf("Error reading file: %v", err)
+	}
+
+	result, _, _, err := ApiAdaptor(string(given), `(?-s)LightComponent!anyrange="(!num)"`, "*4")
+
+	if err != nil {
+		t.Fatalf("Error processing content: %v", err)
+	}
+
+	// We don't really care how many god damn matches there are as long as the result is correct
+	// if matches != 45 {
+	// 	t.Errorf("Expected 45 match, got %d", matches)
+	// }
+	//
+	// if mods != 45 {
+	// 	t.Errorf("Expected 45 modification, got %d", mods)
+	// }
+
+	if string(result) != string(expected) {
+		t.Errorf("expected %s, got %s", expected, result)
+	}
+}
--- a/release.sh
+++ b/release.sh
@@ -0,0 +1,49 @@
+#!/bin/bash
+
+echo "Figuring out the tag..."
+TAG=$(git describe --tags --exact-match 2>/dev/null || echo "")
+if [ -z "$TAG" ]; then
+  # Get the latest tag
+  LATEST_TAG=$(git describe --tags $(git rev-list --tags --max-count=1))
+  # Increment the patch version
+  IFS='.' read -r -a VERSION_PARTS <<< "$LATEST_TAG"
+  VERSION_PARTS[2]=$((VERSION_PARTS[2]+1))
+  TAG="${VERSION_PARTS[0]}.${VERSION_PARTS[1]}.${VERSION_PARTS[2]}"
+  # Create a new tag
+  git tag $TAG
+  git push origin $TAG
+fi
+echo "Tag: $TAG"
+
+echo "Building the thing..."
+go build -o chef.exe .
+go install .
+
+echo "Creating a release..."
+TOKEN="$GITEA_API_KEY"
+GITEA="https://git.site.quack-lab.dev"
+REPO="dave/BigChef"
+# Create a release
+RELEASE_RESPONSE=$(curl -s -X POST \
+  -H "Authorization: token $TOKEN" \
+  -H "Accept: application/json" \
+  -H "Content-Type: application/json" \
+  -d '{
+    "tag_name": "'"$TAG"'",
+    "name": "'"$TAG"'",
+    "draft": false,
+    "prerelease": false
+  }' \
+  $GITEA/api/v1/repos/$REPO/releases)
+
+# Extract the release ID
+echo $RELEASE_RESPONSE
+RELEASE_ID=$(echo $RELEASE_RESPONSE | awk -F'"id":' '{print $2+0; exit}')
+echo "Release ID: $RELEASE_ID"
+
+echo "Uploading the things..."
+curl -X POST \
+  -H "Authorization: token $TOKEN" \
+  -F "attachment=@chef.exe" \
+  "$GITEA/api/v1/repos/$REPO/releases/${RELEASE_ID}/assets?name=chef.exe"
+rm chef.exe
--- a/test.xml
+++ b/test.xml
@@ -1 +0,0 @@
-<config><item><value>100</value></item></config>
--- a/test_complex.xml
+++ b/test_complex.xml
@@ -1,12 +0,0 @@
-<config>
-  <item>
-    <value>75</value>
-    <multiplier>2</multiplier>
-    <divider>4</divider>
-  </item>
-  <item>
-    <value>150</value>
-    <multiplier>3</multiplier>
-    <divider>2</divider>
-  </item>
-</config>
--- a/test_data.xml
+++ b/test_data.xml
@@ -1,37 +0,0 @@
-<?xml version="1.0" encoding="UTF-8"?>
-<testdata>
-    <!-- Numeric values -->
-    <item>
-        <id>1</id>
-        <value>200</value>
-        <price>24.99</price>
-        <quantity>5</quantity>
-    </item>
-    
-    <!-- Text values -->
-    <item>
-        <id>2</id>
-        <name>Test Product</name>
-        <description>This is a test product description</description>
-        <category>Test</category>
-    </item>
-    
-    <!-- Mixed content -->
-    <item>
-        <id>3</id>
-        <name>Mixed Product</name>
-        <price>19.99</price>
-        <code>PRD-123</code>
-        <tags>sale,discount,new</tags>
-    </item>
-    
-    <!-- Empty and special values -->
-    <item>
-        <id>4</id>
-        <value></value>
-        <specialChars>Hello &amp; World &lt; &gt; &quot; &apos;</specialChars>
-        <multiline>Line 1
-Line 2
-Line 3</multiline>
-    </item>
-</testdata> 
--- a/testfiles/OutpostItems.xml
+++ b/testfiles/OutpostItems.xml
--- a/testfiles/OutpostItemsExpected.xml
+++ b/testfiles/OutpostItemsExpected.xml
--- a/testfiles/foo/bar/test.xml
+++ b/testfiles/foo/bar/test.xml
@@ -1 +0,0 @@
-<config><item><value>100</value></item></config>
--- a/utils/db.go
+++ b/utils/db.go
@@ -0,0 +1,120 @@
+package utils
+
+import (
+	"fmt"
+	"path/filepath"
+	"time"
+
+	"git.site.quack-lab.dev/dave/cylogger"
+	"gorm.io/driver/sqlite"
+	"gorm.io/gorm"
+)
+
+type DB interface {
+	DB() *gorm.DB
+	Raw(sql string, args ...any) *gorm.DB
+	SaveFile(filePath string, fileData []byte) error
+	GetFile(filePath string) ([]byte, error)
+	GetAllFiles() ([]FileSnapshot, error)
+	RemoveAllFiles() error
+}
+
+type FileSnapshot struct {
+	Date     time.Time `gorm:"primaryKey"`
+	FilePath string    `gorm:"primaryKey"`
+	FileData []byte    `gorm:"type:blob"`
+}
+
+type DBWrapper struct {
+	db *gorm.DB
+}
+
+var db *DBWrapper
+
+func GetDB() (DB, error) {
+	var err error
+
+	dbFile := filepath.Join("data.sqlite")
+	db, err := gorm.Open(sqlite.Open(dbFile), &gorm.Config{
+		// SkipDefaultTransaction: true,
+		PrepareStmt: true,
+		// Logger:      gormlogger.Default.LogMode(gormlogger.Silent),
+	})
+	if err != nil {
+		return nil, err
+	}
+	db.AutoMigrate(&FileSnapshot{})
+
+	return &DBWrapper{db: db}, nil
+}
+
+// Just a wrapper
+func (db *DBWrapper) Raw(sql string, args ...any) *gorm.DB {
+	return db.db.Raw(sql, args...)
+}
+
+func (db *DBWrapper) DB() *gorm.DB {
+	return db.db
+}
+
+func (db *DBWrapper) FileExists(filePath string) (bool, error) {
+	var count int64
+	err := db.db.Model(&FileSnapshot{}).Where("file_path = ?", filePath).Count(&count).Error
+	return count > 0, err
+}
+
+func (db *DBWrapper) SaveFile(filePath string, fileData []byte) error {
+	log := cylogger.Default.WithPrefix(fmt.Sprintf("SaveFile: %q", filePath))
+	exists, err := db.FileExists(filePath)
+	if err != nil {
+		log.Error("Error checking if file exists: %v", err)
+		return err
+	}
+	log.Debug("File exists: %t", exists)
+	// Nothing to do, file already exists
+	if exists {
+		log.Debug("File already exists, skipping save")
+		return nil
+	}
+	log.Debug("Saving file to database")
+	return db.db.Create(&FileSnapshot{
+		Date:     time.Now(),
+		FilePath: filePath,
+		FileData: fileData,
+	}).Error
+}
+
+func (db *DBWrapper) GetFile(filePath string) ([]byte, error) {
+	log := cylogger.Default.WithPrefix(fmt.Sprintf("GetFile: %q", filePath))
+	log.Debug("Getting file from database")
+	var fileSnapshot FileSnapshot
+	err := db.db.Model(&FileSnapshot{}).Where("file_path = ?", filePath).First(&fileSnapshot).Error
+	if err != nil {
+		return nil, err
+	}
+	log.Debug("File found in database")
+	return fileSnapshot.FileData, nil
+}
+
+func (db *DBWrapper) GetAllFiles() ([]FileSnapshot, error) {
+	log := cylogger.Default.WithPrefix("GetAllFiles")
+	log.Debug("Getting all files from database")
+	var fileSnapshots []FileSnapshot
+	err := db.db.Model(&FileSnapshot{}).Find(&fileSnapshots).Error
+	if err != nil {
+		return nil, err
+	}
+	log.Debug("Found %d files in database", len(fileSnapshots))
+	return fileSnapshots, nil
+}
+
+func (db *DBWrapper) RemoveAllFiles() error {
+	log := cylogger.Default.WithPrefix("RemoveAllFiles")
+	log.Debug("Removing all files from database")
+	err := db.db.Exec("DELETE FROM file_snapshots").Error
+	if err != nil {
+		return err
+	}
+	log.Debug("All files removed from database")
+	return nil
+}
--- a/utils/file.go
+++ b/utils/file.go
@@ -0,0 +1,95 @@
+package utils
+
+import (
+	"fmt"
+	"os"
+	"path/filepath"
+	"strings"
+
+	"git.site.quack-lab.dev/dave/cylogger"
+)
+
+func CleanPath(path string) string {
+	log := cylogger.Default.WithPrefix(fmt.Sprintf("CleanPath: %q", path))
+	log.Trace("Start")
+	path = filepath.Clean(path)
+	path = strings.ReplaceAll(path, "\\", "/")
+	log.Trace("Done: %q", path)
+	return path
+}
+
+func ToAbs(path string) string {
+	log := cylogger.Default.WithPrefix(fmt.Sprintf("ToAbs: %q", path))
+	log.Trace("Start")
+	if filepath.IsAbs(path) {
+		log.Trace("Path is already absolute: %q", path)
+		return CleanPath(path)
+	}
+	cwd, err := os.Getwd()
+	if err != nil {
+		log.Error("Error getting cwd: %v", err)
+		return CleanPath(path)
+	}
+	log.Trace("Cwd: %q", cwd)
+	return CleanPath(filepath.Join(cwd, path))
+}
+
+func ResetWhereNecessary(associations map[string]FileCommandAssociation, db DB) error {
+	log := cylogger.Default.WithPrefix("ResetWhereNecessary")
+	log.Debug("Start")
+	dirtyFiles := make(map[string]struct{})
+	for _, association := range associations {
+		for _, command := range association.Commands {
+			log.Debug("Checking command %q for file %q", command.Name, association.File)
+			if command.Reset {
+				log.Debug("Command %q requires reset for file %q", command.Name, association.File)
+				dirtyFiles[association.File] = struct{}{}
+			}
+		}
+		for _, command := range association.IsolateCommands {
+			log.Debug("Checking isolate command %q for file %q", command.Name, association.File)
+			if command.Reset {
+				log.Debug("Isolate command %q requires reset for file %q", command.Name, association.File)
+				dirtyFiles[association.File] = struct{}{}
+			}
+		}
+	}
+	log.Debug("Dirty files: %v", dirtyFiles)
+	for file := range dirtyFiles {
+		log.Debug("Resetting file %q", file)
+		fileData, err := db.GetFile(file)
+		if err != nil {
+			log.Warning("Failed to get file %q: %v", file, err)
+			continue
+		}
+		log.Debug("Writing file %q to disk", file)
+		err = os.WriteFile(file, fileData, 0644)
+		if err != nil {
+			log.Warning("Failed to write file %q: %v", file, err)
+			continue
+		}
+		log.Debug("File %q written to disk", file)
+	}
+	log.Debug("Done")
+	return nil
+}
+
+func ResetAllFiles(db DB) error {
+	log := cylogger.Default.WithPrefix("ResetAllFiles")
+	log.Debug("Start")
+	fileSnapshots, err := db.GetAllFiles()
+	if err != nil {
+		return err
+	}
+	log.Debug("Found %d files in database", len(fileSnapshots))
+	for _, fileSnapshot := range fileSnapshots {
+		log.Debug("Resetting file %q", fileSnapshot.FilePath)
+		err = os.WriteFile(fileSnapshot.FilePath, fileSnapshot.FileData, 0644)
+		if err != nil {
+			return err
+		}
+		log.Debug("File %q written to disk", fileSnapshot.FilePath)
+	}
+	log.Debug("Done")
+	return nil
+}
--- a/utils/flags.go
+++ b/utils/flags.go
@@ -0,0 +1,10 @@
+package utils
+
+import (
+	"flag"
+)
+
+var (
+	ParallelFiles = flag.Int("P", 100, "Number of files to process in parallel")
+	Filter        = flag.String("f", "", "Filter commands before running them")
+)
--- a/utils/modifycommand.go
+++ b/utils/modifycommand.go
@@ -0,0 +1,260 @@
+package utils
+
+import (
+	"fmt"
+	"os"
+	"path/filepath"
+	"strings"
+
+	logger "git.site.quack-lab.dev/dave/cylogger"
+	"github.com/bmatcuk/doublestar/v4"
+	"gopkg.in/yaml.v3"
+)
+
+type ModifyCommand struct {
+	Name     string   `yaml:"name"`
+	Regex    string   `yaml:"regex"`
+	Lua      string   `yaml:"lua"`
+	Files    []string `yaml:"files"`
+	Reset    bool     `yaml:"reset"`
+	LogLevel string   `yaml:"loglevel"`
+	Isolate  bool     `yaml:"isolate"`
+	NoDedup  bool     `yaml:"nodedup"`
+	Disabled bool     `yaml:"disable"`
+}
+type CookFile []ModifyCommand
+
+func (c *ModifyCommand) Validate() error {
+	if c.Regex == "" {
+		return fmt.Errorf("pattern is required")
+	}
+	if c.Lua == "" {
+		return fmt.Errorf("lua expression is required")
+	}
+	if len(c.Files) == 0 {
+		return fmt.Errorf("at least one file is required")
+	}
+	if c.LogLevel == "" {
+		c.LogLevel = "INFO"
+	}
+	return nil
+}
+
+// Ehh.. Not much better... Guess this wasn't the big deal
+var matchesMemoTable map[string]bool = make(map[string]bool)
+
+func Matches(path string, glob string) (bool, error) {
+	key := fmt.Sprintf("%s:%s", path, glob)
+	if matches, ok := matchesMemoTable[key]; ok {
+		logger.Debug("Found match for file %q and glob %q in memo table", path, glob)
+		return matches, nil
+	}
+	matches, err := doublestar.Match(glob, path)
+	if err != nil {
+		return false, fmt.Errorf("failed to match glob %s with file %s: %w", glob, path, err)
+	}
+	matchesMemoTable[key] = matches
+	return matches, nil
+}
+
+func SplitPattern(pattern string) (string, string) {
+	static, pattern := doublestar.SplitPattern(pattern)
+
+	cwd, err := os.Getwd()
+	if err != nil {
+		return "", ""
+	}
+	if static == "" {
+		static = cwd
+	}
+	if !filepath.IsAbs(static) {
+		static = filepath.Join(cwd, static)
+		static = filepath.Clean(static)
+	}
+	static = strings.ReplaceAll(static, "\\", "/")
+	return static, pattern
+}
+
+type FileCommandAssociation struct {
+	File            string
+	IsolateCommands []ModifyCommand
+	Commands        []ModifyCommand
+}
+
+func AssociateFilesWithCommands(files []string, commands []ModifyCommand) (map[string]FileCommandAssociation, error) {
+	associationCount := 0
+	fileCommands := make(map[string]FileCommandAssociation)
+
+	for _, file := range files {
+		file = strings.ReplaceAll(file, "\\", "/")
+		fileCommands[file] = FileCommandAssociation{
+			File:            file,
+			IsolateCommands: []ModifyCommand{},
+			Commands:        []ModifyCommand{},
+		}
+		for _, command := range commands {
+			for _, glob := range command.Files {
+				static, pattern := SplitPattern(glob)
+				patternFile := strings.Replace(file, static+`/`, "", 1)
+				matches, err := Matches(patternFile, pattern)
+				if err != nil {
+					logger.Trace("Failed to match glob %s with file %s: %v", glob, file, err)
+					continue
+				}
+				if matches {
+					logger.Debug("Found match for file %q and command %q", file, command.Regex)
+					association := fileCommands[file]
+
+					if command.Isolate {
+						association.IsolateCommands = append(association.IsolateCommands, command)
+					} else {
+						association.Commands = append(association.Commands, command)
+					}
+					fileCommands[file] = association
+					associationCount++
+				}
+			}
+		}
+		logger.Debug("Found %d commands for file %q", len(fileCommands[file].Commands), file)
+		if len(fileCommands[file].Commands) == 0 {
+			logger.Info("No commands found for file %q", file)
+		}
+		if len(fileCommands[file].IsolateCommands) > 0 {
+			logger.Info("Found %d isolate commands for file %q", len(fileCommands[file].IsolateCommands), file)
+		}
+	}
+	logger.Info("Found %d associations between %d files and %d commands", associationCount, len(files), len(commands))
+	return fileCommands, nil
+}
+
+func AggregateGlobs(commands []ModifyCommand) map[string]struct{} {
+	logger.Info("Aggregating globs for %d commands", len(commands))
+	globs := make(map[string]struct{})
+	for _, command := range commands {
+		for _, glob := range command.Files {
+			glob = strings.Replace(glob, "~", os.Getenv("HOME"), 1)
+			glob = strings.ReplaceAll(glob, "\\", "/")
+			globs[glob] = struct{}{}
+		}
+	}
+	logger.Info("Found %d unique globs", len(globs))
+	return globs
+}
+
+func ExpandGLobs(patterns map[string]struct{}) ([]string, error) {
+	var files []string
+	filesMap := make(map[string]bool)
+
+	cwd, err := os.Getwd()
+	if err != nil {
+		return nil, fmt.Errorf("failed to get current working directory: %w", err)
+	}
+
+	logger.Debug("Expanding patterns from directory: %s", cwd)
+	for pattern := range patterns {
+		logger.Trace("Processing pattern: %s", pattern)
+		static, pattern := SplitPattern(pattern)
+		matches, _ := doublestar.Glob(os.DirFS(static), pattern)
+		logger.Debug("Found %d matches for pattern %s", len(matches), pattern)
+		for _, m := range matches {
+			m = filepath.Join(static, m)
+			info, err := os.Stat(m)
+			if err != nil {
+				logger.Warning("Error getting file info for %s: %v", m, err)
+				continue
+			}
+			if !info.IsDir() && !filesMap[m] {
+				logger.Trace("Adding file to process list: %s", m)
+				filesMap[m], files = true, append(files, m)
+			}
+		}
+	}
+
+	if len(files) > 0 {
+		logger.Debug("Found %d files to process: %v", len(files), files)
+	}
+	return files, nil
+}
+
+func LoadCommands(args []string) ([]ModifyCommand, error) {
+	commands := []ModifyCommand{}
+
+	logger.Info("Loading commands from cook files: %s", args)
+	for _, arg := range args {
+		newcommands, err := LoadCommandsFromCookFiles(arg)
+		if err != nil {
+			return nil, fmt.Errorf("failed to load commands from cook files: %w", err)
+		}
+		logger.Info("Successfully loaded %d commands from cook files", len(newcommands))
+		for _, cmd := range newcommands {
+			if cmd.Disabled {
+				logger.Info("Skipping disabled command: %s", cmd.Name)
+				continue
+			}
+			commands = append(commands, cmd)
+		}
+		logger.Info("Now total commands: %d", len(commands))
+	}
+
+	logger.Info("Loaded %d commands from all cook file", len(commands))
+	return commands, nil
+}
+
+func LoadCommandsFromCookFiles(pattern string) ([]ModifyCommand, error) {
+	static, pattern := SplitPattern(pattern)
+	commands := []ModifyCommand{}
+	cookFiles, err := doublestar.Glob(os.DirFS(static), pattern)
+	if err != nil {
+		return nil, fmt.Errorf("failed to glob cook files: %w", err)
+	}
+
+	for _, cookFile := range cookFiles {
+		cookFile = filepath.Join(static, cookFile)
+		cookFile = filepath.Clean(cookFile)
+		cookFile = strings.ReplaceAll(cookFile, "\\", "/")
+		logger.Info("Loading commands from cook file: %s", cookFile)
+
+		cookFileData, err := os.ReadFile(cookFile)
+		if err != nil {
+			return nil, fmt.Errorf("failed to read cook file: %w", err)
+		}
+		newcommands, err := LoadCommandsFromCookFile(cookFileData)
+		if err != nil {
+			return nil, fmt.Errorf("failed to load commands from cook file: %w", err)
+		}
+		commands = append(commands, newcommands...)
+	}
+
+	return commands, nil
+}
+
+func LoadCommandsFromCookFile(cookFileData []byte) ([]ModifyCommand, error) {
+	commands := []ModifyCommand{}
+	err := yaml.Unmarshal(cookFileData, &commands)
+	if err != nil {
+		return nil, fmt.Errorf("failed to unmarshal cook file: %w", err)
+	}
+	return commands, nil
+}
+
+// CountGlobsBeforeDedup counts the total number of glob patterns across all commands before deduplication
+func CountGlobsBeforeDedup(commands []ModifyCommand) int {
+	count := 0
+	for _, cmd := range commands {
+		count += len(cmd.Files)
+	}
+	return count
+}
+
+func FilterCommands(commands []ModifyCommand, filter string) []ModifyCommand {
+	filteredCommands := []ModifyCommand{}
+	filters := strings.Split(filter, ",")
+	for _, cmd := range commands {
+		for _, filter := range filters {
+			if strings.Contains(cmd.Name, filter) {
+				filteredCommands = append(filteredCommands, cmd)
+			}
+		}
+	}
+	return filteredCommands
+}
--- a/utils/modifycommand_test.go
+++ b/utils/modifycommand_test.go
--- a/utils/replacecommand.go
+++ b/utils/replacecommand.go
@@ -0,0 +1,58 @@
+package utils
+
+import (
+	"fmt"
+	"sort"
+
+	logger "git.site.quack-lab.dev/dave/cylogger"
+)
+
+type ReplaceCommand struct {
+	From int
+	To   int
+	With string
+}
+
+func ExecuteModifications(modifications []ReplaceCommand, fileData string) (string, int) {
+	var err error
+
+	sort.Slice(modifications, func(i, j int) bool {
+		return modifications[i].From > modifications[j].From
+	})
+	logger.Trace("Preparing to apply %d replacement commands in reverse order", len(modifications))
+
+	executed := 0
+	for _, modification := range modifications {
+		fileData, err = modification.Execute(fileData)
+		if err != nil {
+			logger.Error("Failed to execute replacement: %v", err)
+			continue
+		}
+		executed++
+	}
+	logger.Info("Successfully applied %d text replacements", executed)
+	return fileData, executed
+}
+
+func (m *ReplaceCommand) Execute(fileDataStr string) (string, error) {
+	err := m.Validate(len(fileDataStr))
+	if err != nil {
+		return fileDataStr, fmt.Errorf("failed to validate modification: %v", err)
+	}
+
+	logger.Trace("Replace pos %d-%d with %q", m.From, m.To, m.With)
+	return fileDataStr[:m.From] + m.With + fileDataStr[m.To:], nil
+}
+
+func (m *ReplaceCommand) Validate(maxsize int) error {
+	if m.To < m.From {
+		return fmt.Errorf("command to is less than from: %v", m)
+	}
+	if m.From > maxsize || m.To > maxsize {
+		return fmt.Errorf("command from or to is greater than replacement length: %v", m)
+	}
+	if m.From < 0 || m.To < 0 {
+		return fmt.Errorf("command from or to is less than 0: %v", m)
+	}
+	return nil
+}
--- a/utils/replacecommand_test.go
+++ b/utils/replacecommand_test.go
@@ -0,0 +1,504 @@
+package utils
+
+import (
+	"testing"
+
+	"github.com/stretchr/testify/assert"
+)
+
+func TestReplaceCommandExecute(t *testing.T) {
+	tests := []struct {
+		name        string
+		input       string
+		command     ReplaceCommand
+		expected    string
+		shouldError bool
+	}{
+		{
+			name:        "Simple replacement",
+			input:       "This is a test string",
+			command:     ReplaceCommand{From: 5, To: 7, With: "was"},
+			expected:    "This was a test string",
+			shouldError: false,
+		},
+		{
+			name:        "Replace at beginning",
+			input:       "Hello world",
+			command:     ReplaceCommand{From: 0, To: 5, With: "Hi"},
+			expected:    "Hi world",
+			shouldError: false,
+		},
+		{
+			name:        "Replace at end",
+			input:       "Hello world",
+			command:     ReplaceCommand{From: 6, To: 11, With: "everyone"},
+			expected:    "Hello everyone",
+			shouldError: false,
+		},
+		{
+			name:        "Replace entire string",
+			input:       "Hello world",
+			command:     ReplaceCommand{From: 0, To: 11, With: "Goodbye!"},
+			expected:    "Goodbye!",
+			shouldError: false,
+		},
+		{
+			name:        "Error: From > To",
+			input:       "Test string",
+			command:     ReplaceCommand{From: 7, To: 5, With: "fail"},
+			expected:    "Test string",
+			shouldError: true,
+		},
+		{
+			name:        "Error: From > string length",
+			input:       "Test",
+			command:     ReplaceCommand{From: 10, To: 12, With: "fail"},
+			expected:    "Test",
+			shouldError: true,
+		},
+		{
+			name:        "Error: To > string length",
+			input:       "Test",
+			command:     ReplaceCommand{From: 2, To: 10, With: "fail"},
+			expected:    "Test",
+			shouldError: true,
+		},
+	}
+
+	for _, tc := range tests {
+		t.Run(tc.name, func(t *testing.T) {
+			result, err := tc.command.Execute(tc.input)
+
+			if tc.shouldError {
+				if err == nil {
+					t.Errorf("Expected an error for command %+v but got none", tc.command)
+				}
+			} else {
+				if err != nil {
+					t.Errorf("Unexpected error: %v", err)
+				}
+				if result != tc.expected {
+					t.Errorf("Expected %q, got %q", tc.expected, result)
+				}
+			}
+		})
+	}
+}
+
+func TestExecuteModifications(t *testing.T) {
+	tests := []struct {
+		name          string
+		input         string
+		modifications []ReplaceCommand
+		expected      string
+		expectedCount int
+	}{
+		{
+			name:  "Single modification",
+			input: "Hello world",
+			modifications: []ReplaceCommand{
+				{From: 0, To: 5, With: "Hi"},
+			},
+			expected:      "Hi world",
+			expectedCount: 1,
+		},
+		{
+			name:  "Multiple modifications",
+			input: "This is a test string",
+			modifications: []ReplaceCommand{
+				{From: 0, To: 4, With: "That"},
+				{From: 8, To: 14, With: "sample"},
+			},
+			expected:      "That is sample string",
+			expectedCount: 2,
+		},
+		{
+			name:  "Overlapping modifications",
+			input: "ABCDEF",
+			modifications: []ReplaceCommand{
+				{From: 0, To: 3, With: "123"}, // ABC -> 123
+				{From: 2, To: 5, With: "xyz"}, // CDE -> xyz
+			},
+			// The actual behavior with the current implementation
+			expected:      "123yzF",
+			expectedCount: 2,
+		},
+		{
+			name:  "Sequential modifications",
+			input: "Hello world",
+			modifications: []ReplaceCommand{
+				{From: 0, To: 5, With: "Hi"},
+				{From: 5, To: 6, With: ""}, // Remove the space
+				{From: 6, To: 11, With: "everyone"},
+			},
+			expected:      "Hieveryone",
+			expectedCount: 3,
+		},
+	}
+
+	for _, tc := range tests {
+		t.Run(tc.name, func(t *testing.T) {
+			// Make a copy of the modifications to avoid modifying the test case
+			mods := make([]ReplaceCommand, len(tc.modifications))
+			copy(mods, tc.modifications)
+
+			result, count := ExecuteModifications(mods, tc.input)
+
+			if count != tc.expectedCount {
+				t.Errorf("Expected %d modifications, got %d", tc.expectedCount, count)
+			}
+
+			if result != tc.expected {
+				t.Errorf("Expected %q, got %q", tc.expected, result)
+			}
+		})
+	}
+}
+
+func TestReverseOrderExecution(t *testing.T) {
+	// This test verifies the current behavior of modification application
+	input := "Original text with multiple sections"
+
+	// Modifications in specific positions
+	modifications := []ReplaceCommand{
+		{From: 0, To: 8, With: "Modified"},  // Original -> Modified
+		{From: 9, To: 13, With: "document"}, // text -> document
+		{From: 14, To: 22, With: "without"}, // with -> without
+		{From: 23, To: 31, With: "any"},     // multiple -> any
+	}
+
+	// The actual current behavior of our implementation
+	expected := "Modified document withouttanytions"
+
+	result, count := ExecuteModifications(modifications, input)
+
+	if count != 4 {
+		t.Errorf("Expected 4 modifications, got %d", count)
+	}
+
+	if result != expected {
+		t.Errorf("Expected %q, got %q", expected, result)
+	}
+}
+
+// Replace text in the middle of a string with new content
+func TestReplaceCommandExecute_ReplacesTextInMiddle(t *testing.T) {
+	// Arrange
+	cmd := &ReplaceCommand{
+		From: 6,
+		To:   11,
+		With: "replaced",
+	}
+
+	fileContent := "Hello world, how are you?"
+
+	// Act
+	result, err := cmd.Execute(fileContent)
+
+	// Assert
+	assert.NoError(t, err)
+	assert.Equal(t, "Hello replaced, how are you?", result)
+}
+
+// Replace with empty string (deletion)
+func TestReplaceCommandExecute_DeletesText(t *testing.T) {
+	// Arrange
+	cmd := &ReplaceCommand{
+		From: 6,
+		To:   11,
+		With: "",
+	}
+
+	fileContent := "Hello world, how are you?"
+
+	// Act
+	result, err := cmd.Execute(fileContent)
+
+	// Assert
+	assert.NoError(t, err)
+	assert.Equal(t, "Hello , how are you?", result)
+}
+
+// Replace with longer string than original segment
+func TestReplaceCommandExecute_WithLongerString(t *testing.T) {
+	// Arrange
+	cmd := &ReplaceCommand{
+		From: 6,
+		To:   11,
+		With: "longerreplacement",
+	}
+
+	fileContent := "Hello world, how are you?"
+
+	// Act
+	result, err := cmd.Execute(fileContent)
+
+	// Assert
+	assert.NoError(t, err)
+	assert.Equal(t, "Hello longerreplacement, how are you?", result)
+}
+
+// From and To values are the same (zero-length replacement)
+func TestReplaceCommandExecute_ZeroLengthReplacement(t *testing.T) {
+	// Arrange
+	cmd := &ReplaceCommand{
+		From: 5,
+		To:   5,
+		With: "inserted",
+	}
+
+	fileContent := "Hello world"
+
+	// Act
+	result, err := cmd.Execute(fileContent)
+
+	// Assert
+	assert.NoError(t, err)
+	assert.Equal(t, "Helloinserted world", result)
+}
+
+// From value is greater than To value
+func TestReplaceCommandExecute_FromGreaterThanTo(t *testing.T) {
+	// Arrange
+	cmd := &ReplaceCommand{
+		From: 10,
+		To:   5,
+		With: "replaced",
+	}
+
+	fileContent := "Hello world, how are you?"
+
+	// Act
+	result, err := cmd.Execute(fileContent)
+
+	// Assert
+	assert.Error(t, err)
+	assert.Equal(t, "Hello world, how are you?", result)
+}
+
+// From or To values exceed string length
+func TestReplaceCommandExecute_FromOrToExceedsLength(t *testing.T) {
+	// Arrange
+	cmd := &ReplaceCommand{
+		From: 5,
+		To:   50, // Exceeds the length of the fileContent
+		With: "replaced",
+	}
+
+	fileContent := "Hello world"
+
+	// Act
+	result, err := cmd.Execute(fileContent)
+
+	// Assert
+	assert.Error(t, err)
+	assert.Equal(t, "Hello world", result)
+}
+
+// From or To values are negative
+func TestReplaceCommandExecute_NegativeFromOrTo(t *testing.T) {
+	// Arrange
+	cmd := &ReplaceCommand{
+		From: -1,
+		To:   10,
+		With: "replaced",
+	}
+
+	fileContent := "Hello world, how are you?"
+
+	// Act
+	result, err := cmd.Execute(fileContent)
+
+	// Assert
+	assert.Error(t, err)
+	assert.Equal(t, "Hello world, how are you?", result)
+}
+
+// Modifications are applied in reverse order (from highest to lowest 'From' value)
+func TestExecuteModificationsAppliesInReverseOrder(t *testing.T) {
+	// Setup test data
+	fileData := "This is a test string for replacements"
+
+	modifications := []ReplaceCommand{
+		{From: 0, To: 4, With: "That"},
+		{From: 10, To: 14, With: "sample"},
+		{From: 26, To: 38, With: "modifications"},
+	}
+
+	// Execute the function
+	result, executed := ExecuteModifications(modifications, fileData)
+
+	// Verify results
+	expectedResult := "That is a sample string for modifications"
+	if result != expectedResult {
+		t.Errorf("Expected result to be %q, but got %q", expectedResult, result)
+	}
+
+	if executed != 3 {
+		t.Errorf("Expected 3 modifications to be executed, but got %d", executed)
+	}
+}
+
+// One or more modifications fail but others succeed
+func TestExecuteModificationsWithPartialFailures(t *testing.T) {
+	// Setup test data
+	fileData := "This is a test string for replacements"
+
+	// Create a custom ReplaceCommand implementation that will fail
+	failingCommand := ReplaceCommand{
+		From: 15,
+		To:   10, // Invalid range (To < From) to cause failure
+		With: "will fail",
+	}
+
+	// Valid commands
+	validCommand1 := ReplaceCommand{
+		From: 0,
+		To:   4,
+		With: "That",
+	}
+
+	validCommand2 := ReplaceCommand{
+		From: 26,
+		To:   38,
+		With: "modifications",
+	}
+
+	modifications := []ReplaceCommand{failingCommand, validCommand1, validCommand2}
+
+	// Execute the function
+	result, executed := ExecuteModifications(modifications, fileData)
+
+	// Verify results
+	expectedResult := "That is a test string for modifications"
+	if result != expectedResult {
+		t.Errorf("Expected result to be %q, but got %q", expectedResult, result)
+	}
+
+	// Only 2 out of 3 modifications should succeed
+	if executed != 2 {
+		t.Errorf("Expected 2 modifications to be executed successfully, but got %d", executed)
+	}
+}
+
+// All valid modifications are executed and the modified string is returned
+func TestExecuteModificationsAllValid(t *testing.T) {
+	// Setup test data
+	fileData := "Hello world, this is a test"
+
+	modifications := []ReplaceCommand{
+		{From: 0, To: 5, With: "Hi"},
+		{From: 18, To: 20, With: "was"},
+		{From: 21, To: 27, With: "an example"},
+	}
+
+	// Execute the function
+	result, executed := ExecuteModifications(modifications, fileData)
+
+	// Verify results
+	expectedResult := "Hi world, this was an example"
+	if result != expectedResult {
+		t.Errorf("Expected result to be %q, but got %q", expectedResult, result)
+	}
+
+	if executed != 3 {
+		t.Errorf("Expected 3 modifications to be executed, but got %d", executed)
+	}
+}
+
+// The count of successfully executed modifications is returned
+func TestExecuteModificationsReturnsCorrectCount(t *testing.T) {
+	// Setup test data
+	fileData := "Initial text for testing"
+
+	modifications := []ReplaceCommand{
+		{From: 0, To: 7, With: "Final"},
+		{From: 12, To: 16, With: "example"},
+		{From: 17, To: 24, With: "process"},
+	}
+
+	// Execute the function
+	_, executed := ExecuteModifications(modifications, fileData)
+
+	// Verify the count of executed modifications
+	expectedExecuted := 3
+	if executed != expectedExecuted {
+		t.Errorf("Expected %d modifications to be executed, but got %d", expectedExecuted, executed)
+	}
+}
+
+// Empty modifications list returns the original string with zero executed count
+func TestExecuteModificationsWithEmptyList(t *testing.T) {
+	// Setup test data
+	fileData := "This is a test string for replacements"
+
+	modifications := []ReplaceCommand{}
+
+	// Execute the function
+	result, executed := ExecuteModifications(modifications, fileData)
+
+	// Verify results
+	if result != fileData {
+		t.Errorf("Expected result to be %q, but got %q", fileData, result)
+	}
+
+	if executed != 0 {
+		t.Errorf("Expected 0 modifications to be executed, but got %d", executed)
+	}
+}
+
+// Modifications with identical 'From' values
+func TestExecuteModificationsWithIdenticalFromValues(t *testing.T) {
+	// Setup test data
+	fileData := "This is a test string for replacements"
+
+	modifications := []ReplaceCommand{
+		{From: 10, To: 14, With: "sample"},
+		{From: 10, To: 14, With: "example"},
+		{From: 26, To: 38, With: "modifications"},
+	}
+
+	// Execute the function
+	result, executed := ExecuteModifications(modifications, fileData)
+
+	// Verify results
+	// Yes, it's mangled, yes, it's intentional
+	// Every subsequent command works with the modified contents of the previous command
+	// So by the time we get to "example" the indices have already eaten into "sample"... In fact they have eaten into "samp", "le" is left
+	// So we prepend "example" and end up with "examplele"
+	// Whether sample or example goes first here is irrelevant to us
+	// But it just so happens that sample goes first, so we end up with "examplele"
+	expectedResult := "This is a examplele string for modifications"
+	if result != expectedResult {
+		t.Errorf("Expected result to be %q, but got %q", expectedResult, result)
+	}
+
+	if executed != 3 {
+		t.Errorf("Expected 3 modifications to be executed, but got %d", executed)
+	}
+}
+
+// Modifications that would affect each other if not sorted properly
+func TestExecuteModificationsHandlesOverlappingRanges(t *testing.T) {
+	// Setup test data
+	fileData := "The quick brown fox jumps over the lazy dog"
+
+	modifications := []ReplaceCommand{
+		{From: 4, To: 9, With: "slow"},
+		{From: 10, To: 15, With: "red"},
+		{From: 16, To: 19, With: "cat"},
+	}
+
+	// Execute the function
+	result, executed := ExecuteModifications(modifications, fileData)
+
+	// Verify results
+	expectedResult := "The slow red cat jumps over the lazy dog"
+	if result != expectedResult {
+		t.Errorf("Expected result to be %q, but got %q", expectedResult, result)
+	}
+
+	if executed != 3 {
+		t.Errorf("Expected 3 modifications to be executed, but got %d", executed)
+	}
+}
Author	SHA1	Message	Date
PhatPhuckDave	67fd215d0e	Don't stroke out when backup doesn't exist in db	2025-07-20 11:48:55 +02:00
PhatPhuckDave	9ecbbff6fa	Implement special flags for dump and reset db	2025-07-20 11:47:45 +02:00
PhatPhuckDave	774ac0f0ca	Implement proper "reset" that reads snapshots from database	2025-07-20 11:43:25 +02:00
PhatPhuckDave	b785d24a08	Implement saving snapshots to a database	2025-07-20 11:38:08 +02:00
PhatPhuckDave	22f991e72e	Clean up shop a bit	2025-07-20 11:20:19 +02:00
PhatPhuckDave	5518b27663	Remove deprecated flags and rename filter to f	2025-07-20 11:12:58 +02:00
PhatPhuckDave	0b899dea2c	Add Disabled flag to ModifyCommand	2025-07-19 11:08:51 +02:00
PhatPhuckDave	3424fea8ad	Dump a basic "config" to example usage on failed command	2025-07-19 01:15:48 +02:00
PhatPhuckDave	ddc1d83d58	Fix file associations It was fucked because we were removing the static path and then cramming that into assications	2025-04-22 10:53:25 +02:00
PhatPhuckDave	4b0a85411d	From cook FILE - F I L E - FILEEEEE This is the 4th time I make the SAME fix	2025-04-22 10:46:03 +02:00
PhatPhuckDave	46e871b626	Fix flag collision with logger	2025-04-22 10:45:11 +02:00
PhatPhuckDave	258dcc88e7	Fix reference to utils	2025-04-18 12:48:24 +02:00
PhatPhuckDave	75bf449bed	Remove logger and replace it with a library	2025-04-18 12:47:47 +02:00
PhatPhuckDave	58586395fb	Add file util for later	2025-04-13 21:31:19 +02:00
PhatPhuckDave	c5a68af5e6	PROPERLY implement doublestar	2025-04-13 21:29:18 +02:00
PhatPhuckDave	b4c0284734	Add rimworld cook file	2025-04-09 09:47:53 +02:00
PhatPhuckDave	c5d1dad8de	Rename project to "cook" and ditch loading fgrom args, now files exclusively	2025-04-09 09:47:53 +02:00
PhatPhuckDave	4ff2ee80ee	And fix the god damn backslashes fuck windows	2025-04-01 11:29:57 +02:00
PhatPhuckDave	633eebfd2a	Support ~ in globs	2025-04-01 11:29:02 +02:00
PhatPhuckDave	5a31703840	Implement per command logger	2025-03-29 17:29:21 +01:00
PhatPhuckDave	162d0c758d	Fix some tests	2025-03-29 17:29:21 +01:00
PhatPhuckDave	14d64495b6	Add deduplicate flag	2025-03-29 17:29:21 +01:00
PhatPhuckDave	fe6e97e832	Don't deduplicate (yet)	2025-03-29 17:23:21 +01:00
PhatPhuckDave	35b3d8b099	Reduce some of the reads and writes It's really not necessary	2025-03-28 23:39:11 +01:00
PhatPhuckDave	2e3e958e15	Fix some tests and add some logs	2025-03-28 23:31:44 +01:00
PhatPhuckDave	955afc4295	Refactor running commands to separate functions	2025-03-28 16:59:22 +01:00
PhatPhuckDave	2c487bc443	Implement "Isolate" commands Commands that run alone one by one on reading and writing the file This should be used on commands that will modify a large part of the file (or generally large parts) Since that can fuck up the indices of other commands when ran together	2025-03-28 16:56:39 +01:00
PhatPhuckDave	b77224176b	Add file lua value	2025-03-28 16:47:21 +01:00
PhatPhuckDave	a2201053c5	Remove some random ass fmt printf	2025-03-28 13:24:12 +01:00
PhatPhuckDave	04cedf5ece	Fix the concurrent map writes	2025-03-28 11:35:38 +01:00
PhatPhuckDave	ebb07854cc	Memoize the match table	2025-03-28 11:31:27 +01:00
PhatPhuckDave	8a86ae2f40	Add filter flag	2025-03-28 11:20:44 +01:00
PhatPhuckDave	e8f16dda2b	Housekeeping	2025-03-28 02:14:27 +01:00
PhatPhuckDave	513773f641	Again	2025-03-28 01:26:26 +01:00
PhatPhuckDave	22914fe243	Add a lil log	2025-03-28 01:24:23 +01:00
PhatPhuckDave	2d523dfe64	Rename pattern to regex	2025-03-28 01:08:48 +01:00
PhatPhuckDave	2629722f67	Minor fixes and tweaks	2025-03-28 01:03:27 +01:00
PhatPhuckDave	1f6c4e4976	Fix up the tests and some minor bugs	2025-03-28 00:51:26 +01:00
PhatPhuckDave	bfd08e754e	Replace old tests with asserts	2025-03-28 00:40:53 +01:00
PhatPhuckDave	750010b71a	Add more tests to regex	2025-03-28 00:28:51 +01:00
PhatPhuckDave	9064a53820	Add more tests (and fix some things) for replacecommand	2025-03-28 00:23:42 +01:00
PhatPhuckDave	294c04a11a	Add more tests for modifycommand	2025-03-28 00:03:23 +01:00
PhatPhuckDave	ba7ac07001	Fix up the logs a little	2025-03-27 23:36:56 +01:00
PhatPhuckDave	5d10178bf9	Update old and add new tests	2025-03-27 23:33:57 +01:00
PhatPhuckDave	f91c2b4795	More cleaning up	2025-03-27 23:07:22 +01:00
PhatPhuckDave	057db23d09	Implement panic recovery :??	2025-03-27 23:06:46 +01:00
PhatPhuckDave	bf72734b90	Clean up regex.go a little	2025-03-27 23:04:39 +01:00
PhatPhuckDave	cc30c2bdcb	Cleanup	2025-03-27 22:56:42 +01:00
PhatPhuckDave	f453079c72	Fix up regex.go	2025-03-27 22:50:15 +01:00
PhatPhuckDave	e634fe28bd	Clean up processor	2025-03-27 22:24:59 +01:00
PhatPhuckDave	4e4b7bbd19	Implement parallel file processing	2025-03-27 22:22:43 +01:00
PhatPhuckDave	89eed3f847	Refactor git shit to its own module	2025-03-27 22:20:22 +01:00
PhatPhuckDave	f008efd5e1	Refactor modify and replace to their own files	2025-03-27 22:18:12 +01:00
PhatPhuckDave	f6def1e5a5	Refactor entirety of replace command to main for now	2025-03-27 22:11:03 +01:00
PhatPhuckDave	867b188718	Work out file reading and writing	2025-03-27 22:02:36 +01:00
PhatPhuckDave	aac29a4074	Refactor more stuff around	2025-03-27 21:58:52 +01:00
PhatPhuckDave	8a40f463f7	Implement file command association	2025-03-27 21:54:46 +01:00
PhatPhuckDave	8d4db1da91	Clean up code add some log lines and tidy up expandglobs	2025-03-27 21:49:28 +01:00
PhatPhuckDave	d41e2afe17	Update	2025-03-27 21:43:36 +01:00
PhatPhuckDave	76457d22cf	Partially rework reading args to modify command loading	2025-03-27 21:39:16 +01:00
PhatPhuckDave	912950d463	Remove the vestiges of xml and json	2025-03-27 21:31:45 +01:00
PhatPhuckDave	25326ea11b	Remove xml and json They are simply not as useful as regex at all There is nothing they can do regex cannot And they have one massive penalty: the encoding Which often results in MASSIVE diffs	2025-03-27 21:28:20 +01:00
PhatPhuckDave	df212b7fcc	Remove jsonpath and xpath	2025-03-27 21:27:47 +01:00
PhatPhuckDave	f4a963760a	Add dumptable helper function	2025-03-27 20:07:59 +01:00
PhatPhuckDave	d236811cb9	Introduce a new logging level for lua values	2025-03-27 20:06:50 +01:00
PhatPhuckDave	da93770334	Add strsplit lua helper	2025-03-27 19:56:31 +01:00
PhatPhuckDave	d9f54a8354	Fix test again	2025-03-27 19:49:57 +01:00
PhatPhuckDave	dc8da8ab63	Fix overlapping capture groups	2025-03-27 19:43:06 +01:00
PhatPhuckDave	24262a7dca	Remove old unused xml files	2025-03-27 19:31:54 +01:00
PhatPhuckDave	d77b13c363	Update regression test	2025-03-27 19:31:20 +01:00
PhatPhuckDave	a9c60a3698	Neatly align log columns	2025-03-27 19:26:14 +01:00
PhatPhuckDave	66bcf21d79	Add goroutine numbers to log lines	2025-03-27 19:19:39 +01:00
PhatPhuckDave	e847e5c3ce	Make little better logging	2025-03-27 18:53:02 +01:00
PhatPhuckDave	9a70c9696e	Fix logger	2025-03-27 18:46:28 +01:00
PhatPhuckDave	9cea103042	Implement a more better logging solution	2025-03-27 17:53:43 +01:00
PhatPhuckDave	81d8259dfc	Comment out some xml tests for now We're not working on it for now	2025-03-27 17:46:43 +01:00
PhatPhuckDave	5c5fbac63f	Make doublestar a little cleaner	2025-03-27 17:21:13 +01:00
PhatPhuckDave	3e818e61c7	Add string.format shortcut to lua	2025-03-27 15:38:07 +01:00
PhatPhuckDave	001470ffe4	Fix up regression tests	2025-03-27 15:37:57 +01:00
PhatPhuckDave	d88a76c4e2	Fix logging of groups	2025-03-26 22:26:02 +01:00
PhatPhuckDave	d3a1f1bd96	Rework regex grouping to avoid changing the same area twice	2025-03-26 22:24:19 +01:00
PhatPhuckDave	07a5f3f1a4	Add replaceCommands to avoid index suicide	2025-03-26 21:55:34 +01:00
PhatPhuckDave	e2257e082a	Add a regression test	2025-03-26 21:55:17 +01:00
PhatPhuckDave	b3fce4244d	Fix regex for numbers to support negative numbers	2025-03-26 18:30:21 +01:00
PhatPhuckDave	bd443067b6	Add support for !num inside of named capture groups	2025-03-26 14:04:39 +01:00
PhatPhuckDave	a9b6f7f984	Implement printing from lua	2025-03-26 13:37:39 +01:00
PhatPhuckDave	10c39b02a0	Fix some regex tests	2025-03-26 13:13:53 +01:00
PhatPhuckDave	7f4392b10e	Implement "replacement" variable that simply replaces the match	2025-03-26 13:00:52 +01:00
PhatPhuckDave	7e19cf4e2c	Rework named captures to be array To comply with the whole reverse replacing	2025-03-26 12:50:55 +01:00
PhatPhuckDave	c5fb20e96a	Implement named capture groups	2025-03-26 12:28:28 +01:00
PhatPhuckDave	a8c2257f20	Add named capture group tests	2025-03-26 12:17:01 +01:00
PhatPhuckDave	b63b4d1352	Add some more shorthands for regex	2025-03-26 12:06:04 +01:00
PhatPhuckDave	6a3d44ccd0	Redo what claude removed	2025-03-26 11:42:00 +01:00
PhatPhuckDave	c22e6ff41f	Code polish	2025-03-26 11:40:23 +01:00
PhatPhuckDave	068c64d714	Fix up file reseting	2025-03-26 11:10:43 +01:00
PhatPhuckDave	2c7a4f5d97	Add a lot more logs to regex What the fuck is going on?	2025-03-26 03:30:08 +01:00
PhatPhuckDave	0d7d251e76	Implement git reset	2025-03-26 03:23:16 +01:00
PhatPhuckDave	0d8c447ff6	Add support for git ie. automatically resetting changes to ensure clean slate	2025-03-26 03:22:05 +01:00
PhatPhuckDave	bb14087598	Fix oopsie	2025-03-26 02:52:28 +01:00
PhatPhuckDave	66a522aa12	Try to include xml node children in lua table	2025-03-26 02:50:33 +01:00
PhatPhuckDave	1a4b4f76f2	Map the weird numeric escapes to textual ones	2025-03-26 02:34:21 +01:00
PhatPhuckDave	2bfd9f951e	Fix up some more xml tests and other small bugs	2025-03-26 02:17:42 +01:00
PhatPhuckDave	e5092edf53	Implement parsing xml to and from lua A lot more complex than json.........	2025-03-26 01:36:49 +01:00
PhatPhuckDave	e31c0e4e8f	Implement xpath (by calling library)	2025-03-26 01:19:41 +01:00
PhatPhuckDave	73d93367a0	Refactor some things around a little	2025-03-25 23:16:03 +01:00
PhatPhuckDave	64f690f6b4	Fix usage to reflect recent flag changes	2025-03-25 23:02:32 +01:00
PhatPhuckDave	34477b2c34	Make readme and rework the flags a little	2025-03-25 22:55:01 +01:00
PhatPhuckDave	d5c08d86f5	Code polish	2025-03-25 19:22:44 +01:00
PhatPhuckDave	68127fe453	Add more json tests To bring it in line with the xml ones	2025-03-25 19:22:07 +01:00
PhatPhuckDave	872f2dd46d	Fix another changed test for json	2025-03-25 19:16:09 +01:00
PhatPhuckDave	4eed05c7c2	Fix some more minor bugs and tests	2025-03-25 19:14:21 +01:00
PhatPhuckDave	4640281fbf	Enable root modifications Though I can not see why you would want to..... But there's no reason you would not be able to	2025-03-25 18:57:32 +01:00
PhatPhuckDave	aba10267d1	Fix more tests	2025-03-25 18:47:55 +01:00
PhatPhuckDave	fed140254b	Fix some json tests	2025-03-25 18:32:51 +01:00
PhatPhuckDave	db92033642	Rework rounding and building lua script To allow user script to specify what was modified where	2025-03-25 18:28:33 +01:00
PhatPhuckDave	1b0b198297	Add xpath tests	2025-03-25 17:56:48 +01:00
PhatPhuckDave	15ae116447	Fix up some miscellaneous shit around the project regarding lua conversions	2025-03-25 17:46:21 +01:00
PhatPhuckDave	1bcc6735ab	Improve error handling across the board	2025-03-25 17:27:20 +01:00
PhatPhuckDave	20bab894e3	Add path data to the selected nodes for reconstruction via set	2025-03-25 17:27:20 +01:00
PhatPhuckDave	396992b3d0	Implement Set and SetAll (and Get)	2025-03-25 17:27:20 +01:00
PhatPhuckDave	054dcbf835	Fix up the recursive descent Again I guess?	2025-03-25 17:27:20 +01:00
PhatPhuckDave	88887b9a12	Fix up the recursive descent	2025-03-25 17:27:20 +01:00
PhatPhuckDave	533a563dc5	Fix up parser	2025-03-25 17:27:20 +01:00
PhatPhuckDave	7fc2956b6d	Begin to implement jsonpath	2025-03-25 17:27:20 +01:00
PhatPhuckDave	6f9f3f5eae	Begin to rework the json parsing	2025-03-25 17:27:20 +01:00
PhatPhuckDave	d2419b761e	Implement a generic translator between lua and go tables (maps)	2025-03-25 17:27:20 +01:00
PhatPhuckDave	ab98800ca0	Rework regex processor to be more betterer	2025-03-25 17:27:20 +01:00
PhatPhuckDave	0f7ee521ac	Fix up lua variable writing and reading for regex	2025-03-25 17:27:20 +01:00
PhatPhuckDave	fd81861a64	Fix reading lua variables	2025-03-25 17:27:20 +01:00
PhatPhuckDave	430234dd3b	Clean up after claude	2025-03-25 17:27:20 +01:00
PhatPhuckDave	17bb3d4f71	Refactor everything to processors and implement json and xml processors such as they are	2025-03-25 17:27:20 +01:00
PhatPhuckDave	84e0a8bed6	Add xpath dependencies	2025-03-25 17:27:20 +01:00
PhatPhuckDave	bdcf096fdd	Fix up the oopsies	2025-03-25 17:27:15 +01:00
PhatPhuckDave	1a90046c89	Add release script	2025-03-25 17:26:23 +01:00
				`@@ -1 +0,0 @@`
				`<config><item><value>100</value></item></config>`