And fix the god damn backslashes fuck windows

main.go

@@ -118,6 +118,30 @@ func main() {
 	startTime := time.Now()
 	var fileMutex sync.Mutex
 
+	// Create a map to store loggers for each command
+	commandLoggers := make(map[string]*logger.Logger)
+	for _, command := range commands {
+		// Create a named logger for each command
+		cmdName := command.Name
+		if cmdName == "" {
+			// If no name is provided, use a short version of the regex pattern
+			if len(command.Regex) > 20 {
+				cmdName = command.Regex[:17] + "..."
+			} else {
+				cmdName = command.Regex
+			}
+		}
+
+		// Parse the log level for this specific command
+		cmdLogLevel := logger.ParseLevel(command.LogLevel)
+
+		// Create a logger with the command name as a field
+		commandLoggers[command.Name] = logger.WithField("command", cmdName)
+		commandLoggers[command.Name].SetLevel(cmdLogLevel)
+
+		logger.Debug("Created logger for command %q with log level %s", cmdName, cmdLogLevel.String())
+	}
+
 	// This aggregation is great but what if one modification replaces the whole entire file?
 	// Shit......
 	// TODO: Add "Isolate" field to modifications which makes them run alone
@@ -144,7 +168,7 @@ func main() {
 				return
 			}
 
-			fileDataStr, err = RunOtherCommands(file, fileDataStr, association, &fileMutex)
+			fileDataStr, err = RunOtherCommands(file, fileDataStr, association, &fileMutex, commandLoggers)
 			if err != nil {
 				logger.Error("Failed to run other commands for file %q: %v", file, err)
 				return
@@ -230,11 +254,17 @@ func main() {
 	}
 }
 
-func RunOtherCommands(file string, fileDataStr string, association utils.FileCommandAssociation, fileMutex *sync.Mutex) (string, error) {
+func RunOtherCommands(file string, fileDataStr string, association utils.FileCommandAssociation, fileMutex *sync.Mutex, commandLoggers map[string]*logger.Logger) (string, error) {
 	// Aggregate all the modifications and execute them
 	modifications := []utils.ReplaceCommand{}
 	for _, command := range association.Commands {
-		logger.Info("Processing file %q with command %q", file, command.Regex)
+		// Use command-specific logger if available, otherwise fall back to default logger
+		cmdLogger := logger.DefaultLogger
+		if cmdLog, ok := commandLoggers[command.Name]; ok {
+			cmdLogger = cmdLog
+		}
+
+		cmdLogger.Info("Processing file %q with command %q", file, command.Regex)
 		newModifications, err := processor.ProcessRegex(fileDataStr, command, file)
 		if err != nil {
 			return fileDataStr, fmt.Errorf("failed to process file %q with command %q: %w", file, command.Regex, err)
@@ -248,6 +278,8 @@ func RunOtherCommands(file string, fileDataStr string, association utils.FileCom
 			count = 0
 		}
 		stats.ModificationsPerCommand.Store(command.Name, count.(int)+len(newModifications))
+
+		cmdLogger.Debug("Command %q generated %d modifications", command.Name, len(newModifications))
 	}
 
 	if len(modifications) == 0 {

processor/regex.go

@@ -156,7 +156,11 @@ func ProcessRegex(content string, command utils.ModifyCommand, filename string)
 			}
 		}
 
+		// Use the DeduplicateGroups flag to control whether to deduplicate capture groups
+		if !command.NoDedup {
+			logger.Debug("Deduplicating capture groups as specified in command settings")
 			captureGroups = deduplicateGroups(captureGroups)
+		}
 
 		if err := toLua(L, captureGroups); err != nil {
 			logger.Error("Failed to set Lua variables: %v", err)

utils/modifycommand.go

@@ -19,6 +19,7 @@ type ModifyCommand struct {
 	Reset    bool     `yaml:"reset"`
 	LogLevel string   `yaml:"loglevel"`
 	Isolate  bool     `yaml:"isolate"`
+	NoDedup  bool     `yaml:"nodedup"`
 }
 type CookFile []ModifyCommand
 
@@ -109,6 +110,8 @@ func AggregateGlobs(commands []ModifyCommand) map[string]struct{} {
 	globs := make(map[string]struct{})
 	for _, command := range commands {
 		for _, glob := range command.Files {
+			glob = strings.Replace(glob, "~", os.Getenv("HOME"), 1)
+			glob = strings.ReplaceAll(glob, "\\", "/")
 			globs[glob] = struct{}{}
 		}
 	}

utils/modifycommand_test.go

@@ -158,21 +158,24 @@ func TestAssociateFilesWithCommands(t *testing.T) {
 
 	// The associations expected depends on the implementation
 	// Let's check the actual associations and verify they make sense
-	for file, cmds := range associations {
+	for file, assoc := range associations {
-		t.Logf("File %s is associated with %d commands", file, len(cmds))
+		t.Logf("File %s is associated with %d commands and %d isolate commands", file, len(assoc.Commands), len(assoc.IsolateCommands))
-		for i, cmd := range cmds {
+		for i, cmd := range assoc.Commands {
 			t.Logf("  Command %d: Pattern=%s, Files=%v", i, cmd.Regex, cmd.Files)
 		}
+		for i, cmd := range assoc.IsolateCommands {
+			t.Logf("  Isolate Command %d: Pattern=%s, Files=%v", i, cmd.Regex, cmd.Files)
+		}
 
 		// Specific validation based on our file types
 		switch file {
 		case "file1.xml":
-			if len(cmds) < 1 {
+			if len(assoc.Commands) < 1 {
-				t.Errorf("Expected at least 1 command for file1.xml, got %d", len(cmds))
+				t.Errorf("Expected at least 1 command for file1.xml, got %d", len(assoc.Commands))
 			}
 			// Verify at least one command with *.xml pattern
 			hasXmlGlob := false
-			for _, cmd := range cmds {
+			for _, cmd := range assoc.Commands {
 				for _, glob := range cmd.Files {
 					if glob == "*.xml" {
 						hasXmlGlob = true
@@ -187,12 +190,12 @@ func TestAssociateFilesWithCommands(t *testing.T) {
 				t.Errorf("Expected command with *.xml glob for file1.xml")
 			}
 		case "file2.txt":
-			if len(cmds) < 1 {
+			if len(assoc.Commands) < 1 {
-				t.Errorf("Expected at least 1 command for file2.txt, got %d", len(cmds))
+				t.Errorf("Expected at least 1 command for file2.txt, got %d", len(assoc.Commands))
 			}
 			// Verify at least one command with *.txt pattern
 			hasTxtGlob := false
-			for _, cmd := range cmds {
+			for _, cmd := range assoc.Commands {
 				for _, glob := range cmd.Files {
 					if glob == "*.txt" {
 						hasTxtGlob = true
@@ -207,12 +210,12 @@ func TestAssociateFilesWithCommands(t *testing.T) {
 				t.Errorf("Expected command with *.txt glob for file2.txt")
 			}
 		case "subdir/file3.xml":
-			if len(cmds) < 1 {
+			if len(assoc.Commands) < 1 {
-				t.Errorf("Expected at least 1 command for subdir/file3.xml, got %d", len(cmds))
+				t.Errorf("Expected at least 1 command for subdir/file3.xml, got %d", len(assoc.Commands))
 			}
 			// Should match both *.xml and subdir/* patterns
 			matches := 0
-			for _, cmd := range cmds {
+			for _, cmd := range assoc.Commands {
 				for _, glob := range cmd.Files {
 					if glob == "*.xml" || glob == "subdir/*" {
 						matches++
@@ -393,10 +396,10 @@ func TestLoadCommandsFromCookFileSuccess(t *testing.T) {
 	// Arrange
 	yamlData := []byte(`
 - name: command1
-  pattern: "*.txt"
+  regex: "*.txt"
   lua: replace
 - name: command2
-  pattern: "*.go"
+  regex: "*.go"
   lua: delete
 `)
 
@@ -420,11 +423,11 @@ func TestLoadCommandsFromCookFileWithComments(t *testing.T) {
 	yamlData := []byte(`
     # This is a comment
     - name: command1
-      pattern: "*.txt"
+      regex: "*.txt"
       lua: replace
     # Another comment
     - name: command2
-      pattern: "*.go"
+      regex: "*.go"
       lua: delete
     `)
 
@@ -445,7 +448,7 @@ func TestLoadCommandsFromCookFileWithComments(t *testing.T) {
 // Handle different YAML formatting styles (flow vs block)
 func TestLoadCommandsFromCookFileWithFlowStyle(t *testing.T) {
 	// Arrange
-	yamlData := []byte(`[ { name: command1, pattern: "*.txt", lua: replace }, { name: command2, pattern: "*.go", lua: delete } ]`)
+	yamlData := []byte(`[ { name: command1, regex: "*.txt", lua: replace }, { name: command2, regex: "*.go", lua: delete } ]`)
 
 	// Act
 	commands, err := LoadCommandsFromCookFile(yamlData)
@@ -496,13 +499,13 @@ func TestLoadCommandsFromCookFileWithMultipleEntries(t *testing.T) {
 	// Arrange
 	yamlData := []byte(`
 - name: command1
-  pattern: "*.txt"
+  regex: "*.txt"
   lua: replace
 - name: command2
-  pattern: "*.go"
+  regex: "*.go"
   lua: delete
 - name: command3
-  pattern: "*.md"
+  regex: "*.md"
   lua: append
 `)