Use fucking graphs again

lib/mod.dart

@@ -47,6 +47,17 @@ class Mod {
     this.enabled = false,
   });
 
+  int get tier {
+    if (isBaseGame) return 0;
+    if (isExpansion) return 1;
+    return 2;
+  }
+
+  @override
+  String toString() {
+    return 'Mod{name: $name, id: $id, path: $path, dependencies: $dependencies, loadAfter: $loadAfter, loadBefore: $loadBefore, incompatibilities: $incompatibilities, size: $size, isBaseGame: $isBaseGame, isExpansion: $isExpansion}';
+  }
+
   static Mod fromDirectory(String path, {bool skipFileCount = false}) {
     final logger = Logger.instance;
     final stopwatch = Stopwatch()..start();

lib/mod_list.dart

@@ -255,34 +255,145 @@ class ModList {
   LoadOrder generateLoadOrder([LoadOrder? loadOrder]) {
     loadOrder ??= LoadOrder();
     final logger = Logger.instance;
+    logger.info('Generating load order...');
+
     for (final mod in activeMods.values) {
+      logger.info('Checking mod: ${mod.id}');
+      logger.info('Mod details: ${mod.toString()}');
       for (final incomp in mod.incompatibilities) {
         if (activeMods.containsKey(incomp)) {
           loadOrder.errors.add(
             'Incompatibility detected: ${mod.id} is incompatible with $incomp',
           );
+          logger.warning(
+            'Incompatibility detected: ${mod.id} is incompatible with $incomp',
+          );
+        } else {
+          logger.info('No incompatibility found for: $incomp');
+        }
+      }
+      for (final dep in mod.dependencies) {
+        if (!activeMods.containsKey(dep)) {
+          loadOrder.errors.add('Missing dependency: ${mod.id} requires $dep');
+          logger.warning('Missing dependency: ${mod.id} requires $dep');
+        } else {
+          logger.info('Dependency found: ${mod.id} requires $dep');
         }
       }
     }
 
+    logger.info('Adding active mods to load order...');
     loadOrder.order.addAll(activeMods.values.toList());
+    logger.info(
+      'Active mods added: ${loadOrder.order.map((mod) => mod.id).join(', ')}',
+    );
 
-    loadOrder.order.sort((a, b) {
-      if (a.isBaseGame && !b.isBaseGame) return -1;
-      if (!a.isBaseGame && b.isBaseGame) return 1;
-      if (a.isExpansion && !b.isExpansion) return -1;
-      if (!a.isExpansion && b.isExpansion) return 1;
+    final modMap = {for (final mod in loadOrder.order) mod.id: mod};
+    final graph = <String, Set<String>>{};
+    final inDegree = <String, int>{};
+
+    // Step 1: Initialize graph and inDegree
+    for (final mod in loadOrder.order) {
+      graph[mod.id] = <String>{};
+      inDegree[mod.id] = 0;
+    }
+
+    // Step 2: Build dependency graph
+    void addEdge(String from, String to) {
+      final fromMod = modMap[from];
+      if (fromMod == null) {
+        logger.warning('Missing dependency: $from');
+        return;
+      }
+      final toMod = modMap[to];
+      if (toMod == null) {
+        logger.warning('Missing dependency: $to');
+        return;
+      }
+      if (graph[from]!.add(to)) {
+        inDegree[to] = inDegree[to]! + 1;
+      }
+    }
+
+    for (final mod in loadOrder.order) {
+      for (final target in mod.loadBefore) {
+        addEdge(mod.id, target);
+      }
+      for (final target in mod.loadAfter) {
+        addEdge(target, mod.id);
+      }
+      for (final dep in mod.dependencies) {
+        addEdge(dep, mod.id);
+      }
+    }
+
+    // Step 3: Calculate tiers dynamically with cross-tier dependencies
+    final tiers = <Mod, int>{};
+    for (final mod in loadOrder.order) {
+      int tier = 2; // Default to Tier 2
+
+      // Check if mod loads before any base game mod (Tier 0)
+      final loadsBeforeBase = mod.loadBefore.any(
+        (id) => modMap[id]?.isBaseGame ?? false,
+      );
+      if (mod.isBaseGame || loadsBeforeBase) {
+        tier = 0;
+      } else {
+        // Check if mod loads before any expansion (Tier 1)
+        final loadsBeforeExpansion = mod.loadBefore.any(
+          (id) => modMap[id]?.isExpansion ?? false,
+        );
+        if (mod.isExpansion || loadsBeforeExpansion) {
+          tier = 1;
+        }
+      }
+
+      tiers[mod] = tier;
+    }
+
+    // Step 4: Global priority queue (tier ascending, size descending)
+    final pq = PriorityQueue<Mod>((a, b) {
+      final tierA = tiers[a]!;
+      final tierB = tiers[b]!;
+      if (tierA != tierB) return tierA.compareTo(tierB);
       return b.size.compareTo(a.size);
     });
 
-    Map<String, List<Mod>> relations = {};
-    for (int i = loadOrder.order.length - 1; i >= 0; i--) {
-      final mod = loadOrder!.order[i];
-      logger.info('Processing mod: ${mod.id}');
-      loadOrder = shuffleMod(mod, loadOrder, relations);
+    // Initialize queue with mods having inDegree 0
+    for (final mod in loadOrder.order) {
+      if (inDegree[mod.id] == 0) {
+        pq.add(mod);
+      }
     }
 
-    return loadOrder!;
+    final orderedMods = <Mod>[];
+    while (pq.isNotEmpty) {
+      final current = pq.removeFirst();
+      orderedMods.add(current);
+
+      for (final neighborId in graph[current.id]!) {
+        inDegree[neighborId] = inDegree[neighborId]! - 1;
+        if (inDegree[neighborId] == 0) {
+          final neighbor = modMap[neighborId]!;
+          pq.add(neighbor);
+        }
+      }
+    }
+    if (orderedMods.length != loadOrder.order.length) {
+      loadOrder.errors.add('Cycle detected in dependencies');
+      logger.warning(
+        'Cycle detected in dependencies: expected ${loadOrder.order.length}, got ${orderedMods.length}.',
+      );
+    }
+
+    loadOrder.order = orderedMods;
+    logger.info(
+      'Load order generated successfully with ${loadOrder.order.length} mods.',
+    );
+    for (final mod in loadOrder.order) {
+      logger.info('Mod: ${mod.toString()}');
+    }
+    return loadOrder;
   }
 
   // The point of relations and the recursive call is to handle the case where