Doc: Lots and lots of doxymentation fixes

Doxyfile

@@ -14,7 +14,7 @@ PROJECT_NUMBER         =
 PROJECT_BRIEF          =
 PROJECT_LOGO           =
 OUTPUT_DIRECTORY       = docs/source/
-CREATE_SUBDIRS         = NO
+CREATE_SUBDIRS         = YES
 ALLOW_UNICODE_NAMES    = NO
 OUTPUT_LANGUAGE        = English
 BRIEF_MEMBER_DESC      = YES
@@ -72,7 +72,7 @@ EXTRACT_PACKAGE        = NO
 EXTRACT_STATIC         = YES
 EXTRACT_LOCAL_CLASSES  = YES
 EXTRACT_LOCAL_METHODS  = YES
-EXTRACT_ANON_NSPACES   = NO
+EXTRACT_ANON_NSPACES   = YES
 HIDE_UNDOC_MEMBERS     = NO
 HIDE_UNDOC_CLASSES     = NO
 HIDE_FRIEND_COMPOUNDS  = NO
@@ -130,7 +130,6 @@ RECURSIVE              = YES
 EXCLUDE                =
 EXCLUDE_SYMLINKS       = NO
 EXCLUDE_PATTERNS       = */3rdparty \
-                         */.svn \
                          */script/api
 EXCLUDE_SYMBOLS        =
 EXAMPLE_PATH           =
@@ -183,7 +182,7 @@ DOCSET_FEEDNAME        = "Doxygen generated docs"
 DOCSET_BUNDLE_ID       = org.doxygen.Project
 DOCSET_PUBLISHER_ID    = org.doxygen.Publisher
 DOCSET_PUBLISHER_NAME  = Publisher
-GENERATE_HTMLHELP      = YES
+GENERATE_HTMLHELP      = NO
 CHM_FILE               =
 HHC_LOCATION           =
 GENERATE_CHI           = NO