Replace submodules with actual files

Submodules never were actually useful

eos/effects/flagshipmultirelayeffect.py

@@ -0,0 +1,10 @@
+# Used by:
+# Module: Command Processor I
+type = "passive"
+def handler(fit, module, context):
+    #Note: we increase maxGroupActive by two.
+    #If we only increased it by one, we'd get the number to stay equal
+    #As Comman Processors use one themselves too
+    fit.modules.filteredItemIncrease(lambda mod: mod.item.group.name == "Gang Coordinator" and \
+                                     "maxGroupActive" in mod.itemModifiedAttributes,
+                                     "maxGroupActive", 2)