also use that tool code in the CraftingStep, fixes #619

src/main/java/com/raoulvdberge/refinedstorage/apiimpl/autocrafting/task/CraftingStepCraft.java

@@ -105,6 +105,12 @@ public class CraftingStepCraft extends CraftingStep {
         for (int i = 0; i < toInsert.size(); i++) {
             ItemStack input = toInsert.get(i);
             if (input != null) {
+                // This will be a tool, like a hammer
+                if (input.isItemStackDamageable()) {
+                    compare &= ~IComparer.COMPARE_DAMAGE;
+                } else {
+                    compare |= IComparer.COMPARE_DAMAGE;
+                }
                 ItemStack actualInput = actualInputs.get(input, compare);
                 ItemStack taken = ItemHandlerHelper.copyStackWithSize(actualInput, input.stackSize);
                 took[i] = taken;

src/main/java/com/raoulvdberge/refinedstorage/apiimpl/autocrafting/task/CraftingTask.java

@@ -219,6 +219,7 @@ public class CraftingTask implements ICraftingTask {
                 for (int i = 0; i < usedStacks.size(); i++) {
                     ItemStack input = usedStacks.get(i);
                     if (input != null) {
+                        // This will be a tool, like a hammer
                         if (input.isItemStackDamageable()) {
                             compare &= ~IComparer.COMPARE_DAMAGE;
                         } else {